Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2269491 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2269491, End: 2270516, Length: 1026

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005140:1820970:1822551182255118236541104Vibrio vulnificus YJ016 chromosome II, complete sequenceputative outer membrane protein3e-1479.7
NC_004460:1237129:1238735123873512397931059Vibrio vulnificus CMCP6 chromosome II, complete sequenceOuter membrane protein4e-1375.9
NC_009092:2644164:2667624266762426687811158Shewanella loihica PV-4, complete genomeporin, Gram-negative type4e-1066.2
NC_016612:4119410:4119410411941041205161107Klebsiella oxytoca KCTC 1686 chromosome, complete genomeouter membrane pore protein N, non-specific9e-0858.2
NC_020064:1409596:1409596140959614106931098Serratia marcescens FGI94, complete genomeouter membrane protein (porin)3e-0756.6
NC_014121:1848971:1862509186250918636181110Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeouter membrane pore protein N, non-specific1e-0654.3
NC_020063:2449554:2453423245342324545921170Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane protein (porin)2e-0653.5
NC_015061:2770856:2785809278580927869211113Rahnella sp. Y9602 chromosome, complete genomeporin Gram-negative type6e-0652
NC_016514:2476359:2480816248081624819251110Enterobacter cloacae EcWSU1 chromosome, complete genomeouter membrane protein N7e-0652
NC_016612:5208936:5214784521478452158541071Klebsiella oxytoca KCTC 1686 chromosome, complete genomeporin7e-0651.6