Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2258222 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2258222, End: 2259961, Length: 1740

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011420:1178762:1186639118663911884021764Rhodospirillum centenum SW, complete genomehypothetical protein7e-124444
NC_008782:2326439:2349504234950423512671764Acidovorax sp. JS42, complete genomehypothetical protein2e-122439
NC_008758:12000:1418614186159071722Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completehypothetical protein3e-113409
NC_014307:233045:2410122410122427871776Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein6e-104378
NC_015320:743983:7525227525227542551734Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein8e-95348
NC_007333:810381:8371988371988389341737Thermobifida fusca YX, complete genomehypothetical protein5e-77289
NC_015177:1822000:1837249183724918390241776Pedobacter saltans DSM 12145 chromosome, complete genomeProtein of unknown function DUF23269e-22105
NC_009699:2017329:2034622203462220364151794Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein5e-1893.2
NC_017297:2017000:2034728203472820365211794Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein5e-1893.2
NC_012563:2925472:2947653294765329494461794Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein1e-1688.6
NC_010529:23775:3577435774377681995Cupriavidus taiwanensis plasmid pRALTA, complete sequenceconserved hypothetical protein, COG52933e-1687.4
NC_003911:1265972:1302040130204013038361797Silicibacter pomeroyi DSS-3, complete genomehypothetical protein1e-1585.1
NC_000964:4116104:4129602412960241313621761Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein7e-1169.3
NC_013440:1190832:1220710122071012225001791Haliangium ochraceum DSM 14365, complete genomeProtein of unknown function DUF23261e-0965.1
NC_015061:1251905:1260860126086012625751716Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-0861.2
NC_010682:1652636:1664199166419916659261728Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein8e-0859.3