Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1788224 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1788224, End: 1788391, Length: 168

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:2201820:223463522346352235555921Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase2e-0858.2
NC_005139:2201820:224555622455562245942387Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase3e-0857
NC_016944:514742:532907532907533395489Vibrio cholerae IEC224 chromosome I, complete sequencetransposase5e-0856.2
NC_012668:83641:869528695287440489Vibrio cholerae MJ-1236 chromosome 1, complete sequencetransposase5e-0856.2
NC_004605:1385444:139308113930811393929849Vibrio parahaemolyticus RIMD 2210633 chromosome II, completetransposase9e-0855.5
NC_015633:1702000:171285717128571713777921Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase9e-0855.5
NC_015637:325561:332888332888333808921Vibrio anguillarum 775 chromosome chromosome II, complete sequencetransposase9e-0855.5
NC_015633:338000:347226347226348146921Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase9e-0855.5
NC_009997:4091371:409715840971584098078921Shewanella baltica OS195, complete genometransposase IS4 family protein9e-0855.5
NC_009997:2069894:206989420698942070814921Shewanella baltica OS195, complete genometransposase IS4 family protein9e-0855.5
NC_016901:2070121:207048220704822071402921Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein9e-0855.5
NC_016901:4039335:404512240451224046042921Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein9e-0855.5
NC_009783:1665610:167852716785271679447921Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-0754.7
NC_009783:1665610:166918316691831670103921Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-0753.9
NC_009999:38832:580935809359016924Shewanella baltica OS195 plasmid pS19502, complete sequencetransposase IS4 family protein3e-0753.9
NC_011663:4943179:496783949678394968762924Shewanella baltica OS223 chromosome, complete genometransposase IS4 family protein3e-0753.9
NC_016901:724000:751852751852752775924Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein3e-0753.5
NC_009997:726840:755480755480756403924Shewanella baltica OS195, complete genometransposase IS4 family protein3e-0753.5
NC_009665:693478:721190721190722113924Shewanella baltica OS185 chromosome, complete genometransposase IS4 family protein4e-0753.5
NC_004347:3437369:344041234404123441335924Shewanella oneidensis MR-1, complete genomeISSod12, transposase4e-0753.5
NC_016602:173314:195551195551196471921Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetransposase6e-0752.8