Pre_GI: BLASTP Hits

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Query: NC_005126:949226:955418 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 955418, End: 956575, Length: 1158

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:949226:9504089504089515651158Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein0704
NC_010067:51000:5493254932561461215Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-37155
NC_015376:1752883:1762114176211417634481335Burkholderia gladioli BSR3 chromosome chromosome 2, completehypothetical protein2e-34146
NC_009074:2117500:2129364212936421306801317Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein2e-28127
NC_009778:259241:2712282712282724241197Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1997.4
NC_009778:259241:2699822699822711781197Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1894.4
NC_013282:3719500:372340237234023724379978Cronobacter turicensis, complete genomehypothetical protein7e-1891.7
NC_020260:263528:274735274735275427693Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-1377.4
NC_015761:2982000:298889929888992989885987Salmonella bongori NCTC 12419, complete genomehypothetical protein8e-1168.6
NC_008463:4743296:4758953475895347600411089Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein6e-1065.5
NC_011989:2795811:280054228005422801516975Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein7e-1065.5
NC_014752:834616:866500866500867075576Neisseria lactamica ST-640, complete genomehypothetical protein8e-1065.1
NC_002516:891000:8973358973358984231089Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-0963.9
NC_011770:4924127:4969407496940749704951089Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-0963.5
NC_007434:111607:1186581186581198781221Burkholderia pseudomallei 1710b chromosome I, complete sequencegp303e-0963.5
NC_009076:3876733:3882618388261838836971080Burkholderia pseudomallei 1106a chromosome I, complete sequencegp303e-0963.5
NC_015761:2982000:298790329879032988832930Salmonella bongori NCTC 12419, complete genomehypothetical protein7e-0962
NC_011989:2795811:2801580280158028025871008Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein1e-0861.6
NC_015381:1588742:159127115912711591951681Burkholderia gladioli BSR3 chromosome 1, complete sequenceGP30 family protein8e-0961.6
NC_015761:1970042:198715119871511988134984Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-0860.8
NC_015761:2982000:299313129931312994129999Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-0859.7
NC_007434:1809946:1822420182242018235381119Burkholderia pseudomallei 1710b chromosome I, complete sequencegp307e-0858.9
NC_015381:3607626:3620557362055736216451089Burkholderia gladioli BSR3 chromosome 1, complete sequenceGP30 family protein3e-0756.6