Pre_GI: BLASTP Hits

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Query: NC_005126:142500:145944 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 145944, End: 146141, Length: 198

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010498:4856011:4865478486547848665121035Escherichia coli SMS-3-5, complete genomehypothetical protein2e-1684.3
NC_003198:3881221:389654038965403897523984Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative DNA-binding protein1e-1478.6
NC_016832:3858815:3870827387082738718551029Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-1478.2
NC_016863:3905875:3913032391303239140691038Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-1375.5
NC_008150:4634695:463645446364544637017564Yersinia pestis Antiqua, complete genomehypothetical protein1e-1375.5
NC_017160:4508000:451442545144254514925501Yersinia pestis D182038 chromosome, complete genomehypothetical protein9e-1475.5
NC_016860:3964000:397467439746743975666993Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein9e-1475.5
NC_013592:446092:4557244557244567701047Dickeya dadantii Ech586, complete genomehypothetical protein2e-1374.7
NC_015663:1356982:1380699138069913817361038Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA-binding protein2e-1271.6
NC_016629:3789554:3807920380792038089751056Desulfovibrio africanus str. Walvis Bay chromosome, completevirulence protein-like protein1e-0961.6
NC_007086:3805390:3814061381406138151431083Xanthomonas campestris pv. campestris str. 8004, complete genomevirulence protein8e-0958.9
NC_010688:3740399:3748371374837137494531083Xanthomonas campestris pv. campestris, complete genomehypothetical protein8e-0958.9
NC_007508:1324000:1331921133192113330151095Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein1e-0858.2
NC_015278:176508:184693184693185685993Aerococcus urinae ACS-120-V-Col10a chromosome, complete genomehypothetical protein1e-0755.5
NC_020156:861402:866495866495867487993Nonlabens dokdonensis DSW-6, complete genomeputative DNA-binding protein2e-0754.7
NC_010995:764567:7739767739767750341059Cellvibrio japonicus Ueda107, complete genomeRhuM-like protein7e-0752.8
NC_014246:1457992:148411314841131485069957Mobiluncus curtisii ATCC 43063 chromosome, complete genomeDNA-binding protein8e-0752.4
NC_014828:501342:5066335066335076671035Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein4e-0650.1
NC_014507:1127115:1142721114272111437851065Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein4e-0650.1
NC_015500:484984:5020565020565031381083Treponema brennaborense DSM 12168 chromosome, complete genomevirulence protein5e-0649.7
NC_014933:510164:5446985446985457261029Bacteroides helcogenes P 36-108 chromosome, complete genomehypothetical protein7e-0649.3