Pre_GI: BLASTP Hits

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Query: NC_005126:1223042:1245035 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1245035, End: 1245571, Length: 537

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013892:1483000:149708814970881497630543Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-41167
NC_013892:3278647:329953832995383300077540Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-40164
NC_014029:331919:361177361177361701525Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-40164
NC_014228:3391500:342240734224073422949543Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-40163
NC_009832:358291:376536376536377060525Serratia proteamaculans 568, complete genomehypothetical protein1e-37155
NC_015566:316340:330984330984331508525Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein6e-37153
NC_015567:313035:331149331149331673525Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein6e-37153
NC_009708:4182460:419766841976684198189522Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-34143
NC_016845:4539381:454151845415184542030513Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-33141
NC_004547:611178:624609624609625130522Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-33140
NC_003919:2639080:263968826396882640260573Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-31135
NC_011662:1058794:106095910609591061492534Thauera sp. MZ1T, complete genomehypothetical protein3e-31134
NC_008825:2525380:254436325443632544896534Methylibium petroleiphilum PM1, complete genomehypothetical protein6e-31133
NC_014228:3391500:340217234021723402501330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-31133
NC_008752:558828:572783572783573367585Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein8e-31132
NC_015422:1876102:187671918767191877252534Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein5e-30130
NC_008782:2326439:234449623444962345029534Acidovorax sp. JS42, complete genomehypothetical protein1e-29129
NC_011992:1234610:123624512362451236784540Acidovorax ebreus TPSY, complete genomeputative secreted protein4e-26117
NC_012912:483390:515437515437515979543Dickeya zeae Ech1591, complete genomehypothetical protein3e-26117
NC_010170:1498253:153325815332581533806549Bordetella petrii, complete genomehypothetical protein1e-25115
NC_009138:1974935:201276820127682013316549Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide1e-25115
NC_012691:2614603:265744426574442657989546Tolumonas auensis DSM 9187, complete genomeputative secreted protein2e-25115
NC_011901:2983555:298355529835552984091537Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein4e-25114
NC_004129:5373886:542472054247205425226507Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-25114
NC_014532:3555550:357447835744783575026549Halomonas elongata DSM 2581, complete genomehypothetical protein7e-25113
NC_006513:1379735:145912114591211459657537Azoarcus sp. EbN1, complete genomehypothetical protein2e-24112
NC_007005:1636875:164312416431241643630507Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-24111
NC_015379:2417312:245091224509122451340429Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein6e-24110
NC_009656:4527457:462835746283574628857501Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-24110
NC_010170:4533416:453560545356054536153549Bordetella petrii, complete genomeconserved exported protein9e-24109
NC_010002:4544818:456024645602464560794549Delftia acidovorans SPH-1, complete genomehypothetical protein9e-24109
NC_018080:5091772:515336551533655153865501Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-23109
NC_008344:49039:964559645596997543Nitrosomonas eutropha C91, complete genomehypothetical protein4e-23107
NC_013716:3512950:354268135426813543016336Citrobacter rodentium ICC168, complete genome4e-1890.9
NC_020181:3328844:334564033456403346047408Enterobacter aerogenes EA1509E, complete genomeFIG01045828: hypothetical protein8e-1889.7
NC_016830:4010637:401815740181574018474318Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein3e-1788.2
NC_011751:256830:273350273350273862513Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-1582.4
NC_007946:258747:271135271135271647513Escherichia coli UTI89, complete genomehypothetical protein3e-1581.3
NC_008563:258725:271113271113271625513Escherichia coli APEC O1, complete genomehypothetical protein3e-1581.3
NC_011742:258746:271134271134271646513Escherichia coli S88 chromosome, complete genomehypothetical protein3e-1581.3
NC_011745:258727:273033273033273545513Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-1581.3
NC_008253:257059:270484270484270972489Escherichia coli 536, complete genomehypothetical protein4e-1580.9
NC_015572:2186394:220860622086062209097492Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein9e-1476.3
NC_007484:667879:677870677870678430561Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein2e-1065.1
NC_016830:3869572:392531839253183925527210Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-0858.5