Pre_GI: BLASTP Hits

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Query: NC_004631:4687270:4706497 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 4706497, End: 4706958, Length: 462

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:4460726:449607844960784496539462Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-84309
NC_006905:4638707:466724846672484667709462Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane or exported3e-82303
NC_011294:4560902:458713045871304587591462Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-82302
NC_015761:4355335:437286443728644373325462Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-74278
NC_010102:4745949:476520347652034765571369Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-66251
NC_011205:4718239:474455047445504744918369Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-65246
NC_012125:4716000:474470747447074745024318Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-54211
NC_016513:1924242:193794819379481938439492Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeCrcB family protein1e-1685.1
NC_009615:1734752:1775003177500317773092307Parabacteroides distasonis ATCC 8503 chromosome, complete genomebeta-glycosidase6e-1683.2
NC_015761:1181186:1186601118660111882321632Salmonella bongori NCTC 12419, complete genomebeta-lactamase7e-1579.3
NC_010505:2690939:271704827170482717500453Methylobacterium radiotolerans JCM 2831, complete genomeprotein of unknown function DUF3021e-1478.6
NC_003106:1809137:183144918314491831817369Sulfolobus tokodaii str. 7, complete genomehypothetical protein4e-1477
NC_006347:4031000:4040529404052940421421614Bacteroides fragilis YCH46, complete genomeputative peptidase4e-1373.6
NC_016776:3973428:3982941398294139845541614Bacteroides fragilis 638R, complete genomeputative exported beta-lactamase protein4e-1373.6
NC_003228:3934770:3944283394428339458961614Bacteroides fragilis NCTC 9343, complete genomeputative exported beta-lactamase protein5e-1373.6
NC_009485:1946000:196167619616761962083408Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein5e-1373.2
NC_005877:284829:298843298843299223381Picrophilus torridus DSM 9790, complete genomehypothetical protein3e-1063.9
NC_012623:1405893:142714114271411427512372Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein9e-1062.4
NC_015942:763500:781232781232781696465Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein1e-0858.5
NC_012483:1408500:143718214371821437640459Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein2e-0755.1
NC_014935:1511835:152984715298471530329483Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein4e-0650.4