Pre_GI: BLASTP Hits

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Query: NC_004631:2615908:2631254 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2631254, End: 2631367, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2612809:262815526281552628268114Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-1580.1
NC_003197:332086:349674349674349889216Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein4e-1580.1
NC_011080:333121:354188354188354403216Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein4e-1580.1
NC_016810:329849:349152349152349367216Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1580.1
NC_016831:2667561:267451126745112674726216Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1580.1
NC_016856:332771:350359350359350574216Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein4e-1580.1
NC_016857:329849:349152349152349367216Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein4e-1580.1
NC_016863:332060:349648349648349863216Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein4e-1580.1
NC_003198:331314:349746349746349859114Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-1580.1
NC_011147:2536000:255150325515032551628126Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-1579.7
NC_006511:2540500:255596725559672556092126Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-1579.7
NC_011294:311796:329214329214329429216Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-1478.6
NC_012125:326909:344192344192344407216Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein1e-1478.2
NC_010102:2762304:276741027674102767625216Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1478.2