Pre_GI: BLASTP Hits

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Query: NC_004631:2205821:2223986 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2223986, End: 2224117, Length: 132

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:775636:780835780835780966132Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-1891.3
NC_003197:776238:781437781437781568132Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-1891.3
NC_010102:2322866:234251923425192342650132Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1891.3
NC_006511:2090058:210897621089762109107132Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-1891.3
NC_003198:751779:756978756978757109132Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1891.3
NC_011147:2085241:210415921041592104290132Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-1891.3
NC_016810:775649:780848780848780979132Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1891.3
NC_016832:2201860:222075122207512220882132Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1891.3
NC_016856:776735:781934781934782065132Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-1891.3
NC_016857:775649:780848780848780979132Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-1891.3
NC_016863:776734:781933781933782064132Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-1891.3
NC_011083:824659:829858829858829989132Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-1889.7
NC_011094:842038:847237847237847368132Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1787.4
NC_011080:780850:786049786049786189141Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1684