Pre_GI: BLASTP Hits

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Query: NC_004631:2205821:2212418 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2212418, End: 2212570, Length: 153

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2201860:220919022091902209342153Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-23107
NC_003198:751779:768519768519768671153Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-23107
NC_010102:2322866:233019623301962330348153Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-22104
NC_011083:824659:842148842148842285138Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-2096.7
NC_006511:2090058:209667020966702096807138Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-2096.7
NC_011147:2085241:209185320918532091990138Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-2096.7
NC_003197:776238:793739793739793876138Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-1994.7
NC_011094:842038:859488859488859625138Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1994.7
NC_016810:775649:793150793150793287138Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1994.7
NC_016856:776735:794236794236794373138Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-1994.7
NC_016857:775649:793150793150793287138Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein2e-1994.7
NC_016860:816000:832569832569832706138Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1994.7
NC_016863:776734:794235794235794372138Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-1994.7
NC_017046:775636:793136793136793273138Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-1994.7
NC_011080:780850:798350798350798487138Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein8e-1992.4