Pre_GI: BLASTP Hits

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Query: NC_004631:1271500:1278001 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1278001, End: 1278207, Length: 207

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1693623:170292317029231703129207Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-32137
NC_016863:1359769:136772413677241367930207Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein7e-32135
NC_016856:1411579:141953414195341419740207Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein7e-32135
NC_016810:1358456:136641113664111366617207Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-32135
NC_011147:1573470:158425715842571584463207Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-32135
NC_006511:1579776:158907615890761589282207Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein7e-32135