Pre_GI: BLASTP Hits

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Query: NC_004578:934867:942019 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 942019, End: 943119, Length: 1101

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012214:124337:1317141317141328141101Erwinia pyrifoliae Ep1/96, complete genomeHsvA protein1e-164579
NC_005773:4899252:4914842491484249159391098Pseudomonas syringae pv. phaseolicola 1448A, complete genomeL-arginine:lysine amidinotransferase, putative3e-103375
NC_008209:1385094:1396815139681513979391125Roseobacter denitrificans OCh 114, complete genomeglycine amidinotransferase2e-61236
NC_010334:835500:8504088504088516401233Shewanella halifaxensis HAW-EB4, complete genomeNon-specific serine/threonine protein kinase4e-58225
NC_015381:1623587:1635179163517916362971119Burkholderia gladioli BSR3 chromosome 1, complete sequenceScyllo-inosamine-4-phosphate amidinotransferase7e-55214
NC_013093:2230171:2240627224062722417121086Actinosynnema mirum DSM 43827, complete genomeScyllo-inosamine-4-phosphate amidinotransferase2e-54213
NC_014039:708427:7152887152887164181131Propionibacterium acnes SK137 chromosome, complete genomeamidinotransferase1e-51204
NC_016512:679688:6879676879676890971131Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeglycine amidinotransferase1e-51204
NC_016511:678582:6885826885826897121131Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeglycine amidinotransferase1e-51204
NC_010572:409863:423123423123424121999Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative amidinotransferase7e-2098.6
NC_017249:7993713:804025880402588040623366Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0653.5