Pre_GI: BLASTP Hits

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Query: NC_004578:895019:914941 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 914941, End: 916050, Length: 1110

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1605000:1614863161486316164011539Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein0684
NC_005773:866157:8732058732058747371533Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein0683
NC_015726:2862500:2872138287213828736551518Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein6e-133474
NC_009138:1974935:2034547203454720360641518Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-132472
NC_010170:1551923:1554769155476915562861518Bordetella petrii, complete genomehypothetical protein3e-132471
NC_012691:2614603:2674911267491126764311521Tolumonas auensis DSM 9187, complete genomehypothetical protein7e-132470
NC_010688:2850164:2852894285289428544141521Xanthomonas campestris pv. campestris, complete genomehypothetical protein4e-131468
NC_006513:1379735:1429227142922714307531527Azoarcus sp. EbN1, complete genomehypothetical protein3e-131468
NC_014640:1179382:1182118118211811836351518Achromobacter xylosoxidans A8 chromosome, complete genomeTraG-like family protein3e-131468
NC_011662:1017933:1032128103212810336481521Thauera sp. MZ1T, complete genomehypothetical protein2e-130465
NC_008825:2564965:2564965256496525664881524Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-130465
NC_010170:1152131:1152131115213111536781548Bordetella petrii, complete genomehypothetical protein2e-130465
NC_010002:4572573:4576423457642345779461524Delftia acidovorans SPH-1, complete genomehypothetical protein5e-130464
NC_010170:1417615:1438707143870714402241518Bordetella petrii, complete genomehypothetical protein7e-130463
NC_004129:5373886:5444784544478454463161533Pseudomonas fluorescens Pf-5, complete genomehypothetical protein7e-129460
NC_008463:5313527:5344464534446453459751512Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein7e-128457
NC_009656:4527457:4650071465007146515821512Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-127455
NC_018080:5091772:5175662517566251771971536Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-127454
NC_015379:2417312:2431509243150924330141506Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-127454
NC_007086:1224867:1254415125441512559531539Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein5e-127454
NC_003902:3666544:3691843369184336933811539Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein5e-127454
NC_013421:1744928:1758243175824317597601518Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-126451
NC_008752:620802:6342056342056357191515Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-124445
NC_012912:483390:4950984950984966211524Dickeya zeae Ech1591, complete genomehypothetical protein4e-124444
NC_021150:3698696:3701737370173737033021566Azotobacter vinelandii CA6, complete genomehypothetical protein1e-123443
NC_012560:3698697:3701738370173837033031566Azotobacter vinelandii DJ, complete genomehypothetical protein1e-123443
NC_008344:49039:7248472484739891506Nitrosomonas eutropha C91, complete genomehypothetical protein2e-120432
NC_017986:409899:4115694115694131071539Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-109395
NC_015733:2581324:2630368263036826319061539Pseudomonas putida S16 chromosome, complete genomehypothetical protein5e-109394
NC_007492:3462929:3465587346558734671311545Pseudomonas fluorescens PfO-1, complete genomehypothetical protein6e-109394
NC_010501:3671517:3674161367416136756991539Pseudomonas putida W619, complete genomehypothetical protein3e-108392
NC_012660:2045398:2096451209645120980071557Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-108391
NC_016830:3869572:3887861388786138894021542Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein6e-106384
NC_009512:3334579:3337277333727733388151539Pseudomonas putida F1, complete genomehypothetical protein6e-105381
NC_010067:3056774:3061889306188930633701482Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-93341
NC_013716:3512950:3530805353080535322831479Citrobacter rodentium ICC168, complete genomeputative conjugative transfer system protein TraG (fragment)3e-92338
NC_012731:560199:5837235837235852251503Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-86319
NC_004547:639726:6425056425056440371533Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-84311
NC_012214:3303955:3316315331631533178441530Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-83310
NC_012779:346998:3584833584833600181536Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-83308
NC_015567:346500:3499333499333514501518Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-82306
NC_015566:345084:3497683497683512851518Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-82306
NC_014029:331919:3818303818303833681539Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-82306
NC_009832:4564752:4615842461584246173651524Serratia proteamaculans 568, complete genomehypothetical protein3e-82305
NC_016832:4425330:4428465442846544299701506Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-81303
NC_012125:4536383:4539518453951845410231506Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-81303
NC_003198:4453457:4456592445659244580971506Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-81303
NC_013421:701005:7220397220397236041566Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-77290
NC_016845:4498097:4516301451630145178301530Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-77290
NC_013892:1457500:1460290146029014618041515Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-76286
NC_014228:3353896:3368038336803833694321395Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-74277
NC_014228:3442159:3457762345776234592761515Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-73277
NC_010554:2789722:2807168280716828086791512Proteus mirabilis HI4320, complete genomehypothetical protein4e-73275
NC_014228:3391500:3397524339752433986121089Xenorhabdus nematophila ATCC 19061, complete genome5e-73275
NC_016809:112410:1178701178701193631494Haemophilus influenzae 10810, complete genomehypothetical protein2e-69263
NC_014532:3596097:3597877359787735994181542Halomonas elongata DSM 2581, complete genomehypothetical protein3e-58226
NC_018691:2288000:2301030230103023025261497Alcanivorax dieselolei B5 chromosome, complete genomeputative membrane protein-like protein5e-55215
NC_009792:3245368:325210332521033252726624Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-51202
NC_015572:2186394:2230093223009322316131521Methylomonas methanica MC09 chromosome, complete genomehypothetical protein2e-30134
NC_008752:3007073:3022694302269430243191626Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein4e-28125
NC_018697:1343756:1375990137599013775341545Cycloclasticus sp. P1 chromosome, complete genomehypothetical protein6e-23108
NC_015554:4648919:4669419466941946709871569Alteromonas sp. SN2 chromosome, complete genomehypothetical protein2e-22107
NC_009792:3245368:325301532530153253584570Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-0858.5