Pre_GI: BLASTP Hits

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Query: NC_004578:5336773:5395243 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 5395243, End: 5395767, Length: 525

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010322:5349000:537278953727895373517729Pseudomonas putida GB-1 chromosome, complete genomemetallophosphoesterase6e-46182
NC_004578:20738:393453934540082738Pseudomonas syringae pv. tomato str. DC3000, complete genomeSer/Thr protein phosphatase family protein3e-33140
NC_020829:1:327453274533497753Pseudomonas denitrificans ATCC 13867, complete genomeSer/Thr protein phosphatase family protein2e-28125
NC_010682:3033646:304104930410493041825777Ralstonia pickettii 12J chromosome 1, complete sequencemetallophosphoesterase3e-26117
NC_010682:1763769:178032917803291781105777Ralstonia pickettii 12J chromosome 1, complete sequencemetallophosphoesterase3e-26117
NC_016616:3585435:359924535992453600021777Dechlorosoma suillum PS chromosome, complete genomeputative phosphohydrolase1e-25115
NC_012587:2298324:231220923122092312973765Rhizobium sp. NGR234, complete genomeputative phosphoesterase4e-25114
NC_018000:4958637:499384249938424994609768Sinorhizobium fredii USDA 257 chromosome, complete genomephosphoesterase3e-25114
NC_008576:2458573:247372424737242474482759Magnetococcus sp. MC-1, complete genomemetallophosphoesterase6e-25113
NC_008700:367949:374607374607375368762Shewanella amazonensis SB2B, complete genomephosphoesterase, related to the Icc protein6e-24110
NC_006350:845513:874574874574875362789Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phosphoesterase3e-23107
NC_009659:3384997:340367634036763404458783Janthinobacterium sp. Marseille chromosome, complete genomemetallophosphoesterase5e-23107
NC_015138:2364500:237940023794002380230831Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completemetallophosphoesterase6e-23106
NC_008380:2287327:230202823020282302795768Rhizobium leguminosarum bv. viciae 3841, complete genomeputative phosphatase1e-21102
NC_013422:991500:101660110166011017401801Halothiobacillus neapolitanus c2, complete genomemetallophosphoesterase2e-2099
NC_007958:4985:237932379324572780Rhodopseudomonas palustris BisB5, complete genomemetallophosphoesterase1e-2099
NC_014541:4167916:417915141791514179948798Ferrimonas balearica DSM 9799 chromosome, complete genomemetallophosphoesterase3e-2097.8
NC_015850:1155376:116184311618431162649807Acidithiobacillus caldus SM-1 chromosome, complete genomemetallophosphoesterase5e-2097.1
NC_007964:4157500:415823341582334158997765Nitrobacter hamburgensis X14, complete genomemetallophosphoesterase3e-1994.7
NC_011004:4073916:407474240747424075620879Rhodopseudomonas palustris TIE-1, complete genomemetallophosphoesterase1e-1892.4
NC_011758:326366:3471203471203483941275Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completemetallophosphoesterase5e-1890.5
NC_010814:1441327:146667214666721467463792Geobacter lovleyi SZ, complete genomemetallophosphoesterase2e-1788.6
NC_009468:38112:577595775958571813Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequencemetallophosphoesterase9e-1786.3
NC_009138:2110500:211105021110502111484435Herminiimonas arsenicoxydans, complete genomePutative phosphoesterase (partial)1e-1685.9
NC_009667:2860818:287595328759532876807855Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencemetallophosphoesterase3e-1684.7
NC_009667:1203861:122035712203571221190834Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencemetallophosphoesterase8e-1683.2
NC_015850:1155376:115766611576661158433768Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phosphatase3e-1374.7
NC_015160:2145915:214977221497722150539768Odoribacter splanchnicus DSM 20712 chromosome, complete genomemetallophosphoesterase3e-1374.3
NC_008255:3331613:335204533520453352686642Cytophaga hutchinsonii ATCC 33406, complete genomehypothetical protein2e-1168.6
NC_013222:229190:236228236228236992765Robiginitalea biformata HTCC2501, complete genomehypothetical protein1e-0859.7
NC_016609:8772011:877654387765438777337795Niastella koreensis GR20-10 chromosome, complete genomemetallophosphoesterase3e-0857.8