Pre_GI: BLASTP Hits

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Query: NC_004578:4781326:4803256 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4803256, End: 4803810, Length: 555

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008543:90312:108525108525109079555Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceOsmC family protein2e-79294
NC_008061:2153495:216069421606942161248555Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceOsmC-like protein2e-79294
NC_008545:115292:128484128484129038555Burkholderia cenocepacia HI2424 plasmid 1, complete sequenceOsmC family protein4e-79293
NC_010552:335989:344329344329344883555Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceOsmC family protein7e-78289
NC_010515:1375091:140588714058871406441555Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceOsmC family protein7e-78289
NC_008390:2156188:217563921756392176199561Burkholderia cepacia AMMD chromosome 1, complete sequenceOsmC family protein2e-76284
NC_013743:1045488:106089210608921061512621Haloterrigena turkmenica DSM 5511, complete genomeOsmC family protein7e-32136
NC_014974:1076565:110484711048471105407561Thermus scotoductus SA-01 chromosome, complete genomeOsmC family protein2e-26118
NC_014831:2082304:210308221030822103618537Thermaerobacter marianensis DSM 12885 chromosome, complete genomeOsmC family protein8e-26116
NC_019673:6473743:647327364732736473788516Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein8e-24109
UCMB5137:2054735:209557320955732096097525Bacillus atrophaeus UCMB-5137unknown1e-22105
NC_012522:7837071:784813178481317848691561Rhodococcus opacus B4, complete genomehypothetical protein2e-1995.1
NC_012522:7871173:787692578769257877497573Rhodococcus opacus B4, complete genomehypothetical protein7e-1993.6
UCMB5137:2054735:210050621005062101021516Bacillus atrophaeus UCMB-5137unknown5e-1890.5
NC_015850:1947000:195229419522941952638345Acidithiobacillus caldus SM-1 chromosome, complete genomeOsmC family protein1e-1789.7
NC_015850:548821:563327563327563671345Acidithiobacillus caldus SM-1 chromosome, complete genomeOsmC family protein1e-1789.7
NC_011295:1218792:122854212285421228982441Coprothermobacter proteolyticus DSM 5265, complete genomeconserved protein with OsmC domain7e-1786.7
NC_013889:1740858:176443017644301765011582Thioalkalivibrio sp. K90mix chromosome, complete genomeOsmC family protein9e-1683.2
NC_008269:868000:907771907771908301531Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencehypothetical protein3e-1581.6
NC_008269:868000:879771879771880301531Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencehypothetical protein3e-1581.6
NC_017221:495088:508136508136508567432Bifidobacterium longum subsp. longum KACC 91563 chromosome,OsmC family protein8e-1270.1
NC_012791:2233098:224276522427652243322558Variovorax paradoxus S110 chromosome 1, complete genomeOsmC family protein1e-1169.3
NC_014222:1677610:168557616855761686025450Methanococcus voltae A3 chromosome, complete genomeOsmC family protein7e-0753.5
NC_008554:2308500:232258623225862323167582Syntrophobacter fumaroxidans MPOB, complete genomeOsmC family protein2e-0651.6
NC_013406:3874157:389194338919433892494552Paenibacillus sp. Y412MC10 chromosome, complete genomeOsmC family protein3e-0651.2