Pre_GI: BLASTP Hits

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Query: NC_004578:4781326:4796392 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4796392, End: 4796724, Length: 333

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010515:1375091:140737514073751407716342Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencealkylhydroperoxidase like protein, AhpD family4e-40163
NC_010552:335989:345818345818346159342Burkholderia ambifaria MC40-6 chromosome 2, complete sequencealkylhydroperoxidase like protein, AhpD family4e-40163
NC_008061:2153495:216229721622972162638342Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceAlkylhydroperoxidase AhpD core5e-40162
NC_008543:90312:107135107135107476342Burkholderia cenocepacia HI2424 chromosome 2, complete sequencealkylhydroperoxidase like protein, AhpD family5e-40162
NC_008545:115292:127094127094127435342Burkholderia cenocepacia HI2424 plasmid 1, complete sequencealkylhydroperoxidase like protein, AhpD family5e-40162
NC_011000:3493575:350912335091233509452330Burkholderia cenocepacia J2315 chromosome 1, complete sequencecarboxymuconolactone decarboxylase family protein2e-34144
NC_008060:341851:346264346264346593330Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceAlkylhydroperoxidase AhpD core2e-34144
NC_012968:63898:677546775468098345Methylotenera mobilis JLW8, complete genomealkylhydroperoxidase like protein, AhpD family1e-32138
NC_017033:1939507:195938319593831959727345Frateuria aurantia DSM 6220 chromosome, complete genomealkylhydroperoxidase1e-30131
NC_009659:1024201:103995210399521040287336Janthinobacterium sp. Marseille chromosome, complete genomecarboxymuconolactone decarboxylase1e-27121
NC_008392:1029134:107691910769191077263345Burkholderia cepacia AMMD chromosome 3, complete sequencealkylhydroperoxidase like protein, AhpD family2e-25114
NC_010557:679656:737958737958738302345Burkholderia ambifaria MC40-6 chromosome 3, complete sequencealkylhydroperoxidase like protein, AhpD family2e-25114
NC_008390:2156188:217774121777412178082342Burkholderia cepacia AMMD chromosome 1, complete sequencealkylhydroperoxidase like protein, AhpD family1e-1788.6
NC_010519:1165418:118288411828841183225342Haemophilus somnus 2336 chromosome, complete genomealkylhydroperoxidase3e-1683.6
NC_008309:1289370:129113312911331291474342Haemophilus somnus 129PT, complete genomehypothetical protein3e-1683.6
NC_015573:330966:338137338137338478342Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomealkylhydroperoxidase like protein2e-1477.8
UCMB5137:2054735:209972720997272100386660Bacillus atrophaeus UCMB-5137unknown1e-1375.5
NC_012115:691154:702046702046702378333Nautilia profundicola AmH, complete genomeDNA-binding protein6e-1372.8
NC_009254:745706:754255754255754623369Burkholderia vietnamiensis G4 chromosome 3, complete sequencealkylhydroperoxidase3e-1063.9
NC_007650:420745:434705434705435058354Burkholderia thailandensis E264 chromosome II, complete sequencecarboxymuconolactone decarboxylase1e-0962
NC_003919:1203405:120637812063781206773396Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-0961.6
NC_003911:4001094:400316840031684003500333Silicibacter pomeroyi DSS-3, complete genome4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein2e-0961.2
NC_014313:3617910:363230136323013632633333Hyphomicrobium denitrificans ATCC 51888 chromosome, completealkylhydroperoxidase like protein, AhpD family1e-0858.9
NC_012522:7837071:784674978467497847096348Rhodococcus opacus B4, complete genomehypothetical protein3e-0857
NC_008699:1673181:171634117163411716676336Nocardioides sp. JS614, complete genomealkylhydroperoxidase like protein, AhpD family2e-0754.7
NC_015717:4736500:475015747501574750477321Hyphomicrobium sp. MC1, complete genomealkylhydroperoxidase-like protein4e-0753.5
NC_014364:2246524:225307622530762253438363Spirochaeta smaragdinae DSM 11293 chromosome, complete genomealkylhydroperoxidase like protein, AhpD family6e-0752.8
NC_016584:4478200:4486106448610644876981593Desulfosporosinus orientis DSM 765 chromosome, complete genomealkylhydroperoxidase3e-0650.4
NC_009663:982048:984163984163984504342Sulfurovum sp. NBC37-1, complete genomehypothetical protein3e-0650.4
NC_010162:10962500:109653831096538310965721339Sorangium cellulosum 'So ce 56', complete genomehypothetical protein5e-0649.7
NC_021172:3786725:380148438014843801744261Hyphomicrobium denitrificans 1NES1, complete genomealkylhydroperoxidase like protein6e-0649.3
NC_014253:1818000:183105118310511831539489Methanohalobium evestigatum Z-7303 chromosome, complete genomealkylhydroperoxidase-like protein8e-0648.9