Pre_GI Gene

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Host: NC_014313 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014313:3617910 Hyphomicrobium denitrificans ATCC 51888 chromosome, complete

Host Lineage: Hyphomicrobium denitrificans; Hyphomicrobium; Hyphomicrobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environment: Fresh water; Temp: Mesophile. An aerobic, motile Gram-negative bacterium. Hyphomicrobium denitrificans has a biphasic life style, which consists of a motile phase of flagellated swarmer cells, and a cessile phase in which a long prosthecate is produced at one end of the bacteria through which budding cells emerge. Newly budded cells in turn produce flagella and go through a motile phase and the cycle continues. These organisms can colonize the surfaces of marine environments which enables additional species to colonize at later stages. This organism is also able to utilize methanol as a sole source of energy.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
62505444Rhodanese domain proteinQuickGO ontologyBLASTP
62121411521chromosomal replication initiator protein DnaAQuickGO ontologyBLASTP
248035981119DNA polymerase III beta subunitQuickGO ontologyBLASTP
37024091390protein of unknown function DUF559QuickGO ontologyBLASTP
361791036190281119transcriptional regulator LuxR familyQuickGO ontologyBLASTP
36192073619608402hypothetical proteinBLASTP
36197003619942243hypothetical proteinBLASTP
362020536216021398Citrate transporterQuickGO ontologyBLASTP
362179236238192028Peptidase M23QuickGO ontologyBLASTP
36245983626066146916S ribosomal RNAQuickGO ontologyBLASTP
3626270362634677tRNA-IleQuickGO ontology
3626435362651076tRNA-AlaQuickGO ontologyBLASTP
36268793629669279123S ribosomal RNAQuickGO ontologyBLASTP
362986136299751155S ribosomal RNAQuickGO ontologyBLASTP
36304363630822387hypothetical proteinBLASTP
36308303631660831iron permease FTR1QuickGO ontologyBLASTP
36317183632185468protein of unknown function DUF1348QuickGO ontologyBLASTP
36323013632633333alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
3632618363421015932-polyprenylphenol 6-hydroxylaseQuickGO ontologyBLASTP
36344253634718294hypothetical proteinBLASTP
36348453635627783ubiquinonemenaquinone biosynthesis methyltransferaseQuickGO ontologyBLASTP
36357053636586882formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
36365923637206615hypothetical proteinBLASTP
36372463637830585hypothetical proteinBLASTP
36381323638398267ribosomal protein S20QuickGO ontologyBLASTP