Pre_GI: BLASTP Hits

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Query: NC_004578:4708220:4723642 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4723642, End: 4724409, Length: 768

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014118:1083492:109724810972481098084837Burkholderia sp. CCGE1002 chromosome chromosome 2, completeFAD-binding 9 siderophore-interacting domain protein5e-52204
NC_010515:1491590:150734415073441508165822Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceFAD-binding 9 siderophore-interacting domain protein8e-52203
NC_009075:15017:199041990420731828Burkholderia pseudomallei 668 chromosome II, complete sequencesiderophore-interacting protein1e-51203
NC_010170:4196197:420397342039734204797825Bordetella petrii, complete genomeiron utilization protein4e-50197
NC_015947:444466:446203446203447000798Burkholderia sp. JV3 chromosome, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein8e-47187
NC_010943:493002:496261496261497058798Stenotrophomonas maltophilia K279a, complete genomeputative siderophore-interacting protein3e-46185
NC_011071:429204:431753431753432550798Stenotrophomonas maltophilia R551-3, complete genomeSiderophore-interacting protein3e-46185
NC_009436:3807420:382408638240863824850765Enterobacter sp. 638, complete genomeFAD-binding 9, siderophore-interacting domain-containing protein5e-36151
AP010958:3853082:389136438913643892128765Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted siderophore interacting protein9e-35147
NC_013353:3853082:389136438913643892128765Escherichia coli O103:H2 str. 12009, complete genomesiderophore interacting protein9e-35147
NC_009921:3551036:3576191357619135780621872Frankia sp. EAN1pec, complete genomeSiderophore-interacting protein3e-30132
NC_014664:1360524:1364037136403713651341098Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeSiderophore-interacting protein2e-28125
NC_013093:2633000:266036126603612661191831Actinosynnema mirum DSM 43827, complete genomeSiderophore-interacting protein2e-25116
NC_009654:3980289:399013939901393990945807Marinomonas sp. MWYL1, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein2e-25115
NC_016624:112919:1292671292671303701104Azospirillum lipoferum 4B plasmid AZO_p5, complete sequencesiderophore-interacting protein7e-24110
NC_015671:139892:1410421410421420521011Cellvibrio gilvus ATCC 13127 chromosome, complete genomeSiderophore-interacting protein9e-23107
NC_020211:3151458:315489431548943155712819Serratia marcescens WW4, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein1e-21103
NC_008027:3953951:395395139539513954883933Pseudomonas entomophila L48, complete genomesiderophore interacting protein3e-21102
NC_015563:5162177:518064551806455181418774Delftia sp. Cs1-4 chromosome, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein6e-21101
NC_015514:3307199:330975033097503310613864Cellulomonas fimi ATCC 484 chromosome, complete genomeSiderophore-interacting protein6e-21101
NC_002516:2222896:222289622228962223804909Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-20100
NC_008463:3394000:341039534103953411303909Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative siderophore-interacting protein1e-20100
NC_011770:3626000:364201936420193642927909Pseudomonas aeruginosa LESB58, complete genomeputative siderophore-interacting protein1e-20100
NC_012669:96966:119240119240120073834Beutenbergia cavernae DSM 12333, complete genomeSiderophore-interacting protein1e-1893.6
NC_008268:7052202:706871170687117069490780Rhodococcus sp. RHA1, complete genomehypothetical protein2e-1789.4
NC_014550:301894:307299307299308183885Arthrobacter arilaitensis Re117, complete genomeputative siderophore-interacting protein2e-1789.4
NC_010545:1781393:178336117833611784227867Corynebacterium urealyticum DSM 7109, complete genomeputative siderophore-interacting protein3e-1788.6
NC_006371:1973500:197778219777821978603822Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein1e-1687
NC_012912:647369:670534670534671436903Dickeya zeae Ech1591, complete genomeFAD-binding 9 siderophore-interacting domain protein1e-1583.6
NC_004547:2285092:230040123004012301204804Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative siderophore-interacting protein2e-1583.2
NC_006361:2534192:253419225341922534926735Nocardia farcinica IFM 10152, complete genomehypothetical protein5e-1581.6
NC_013947:3080290:308175230817523082579828Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein3e-1479.3
NC_014550:301894:3130473130473142821236Arthrobacter arilaitensis Re117, complete genomeputative siderophore-interacting protein1e-1170.5
NC_010545:404111:427085427085428014930Corynebacterium urealyticum DSM 7109, complete genomeputative iron utilization protein2e-0962.8
NC_015673:2206881:223045022304502231295846Corynebacterium resistens DSM 45100 chromosome, complete genomeputative iron utilization protein1e-0757