Pre_GI: BLASTP Hits

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Query: NC_004578:3241618:3262476 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3262476, End: 3263660, Length: 1185

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011884:1898702:1913560191356019160042445Cyanothece sp. PCC 7425, complete genomeUDP-galactopyranose mutase1e-109396
NC_007947:1229807:1246223124622312474851263Methylobacillus flagellatus KT, complete genomehypothetical protein2e-109395
NC_015064:1021483:1023260102326010257522493Acidobacterium sp. MP5ACTX9 chromosome, complete genomeUDP-galactopyranose mutase5e-101368
NC_008536:435221:4450214450214476062586Solibacter usitatus Ellin6076, complete genomeamine oxidase7e-86317
NC_014562:469154:4892794892794930403762Pantoea vagans C9-1 chromosome, complete genomePutative teichuronic acid biosynthesis glycosyltransferase tuaH2e-81303
NC_013665:231023:2357042357042368311128Methanocella paludicola SANAE, complete genomehypothetical protein2e-38159
NC_012108:2220983:2230382223038222315211140Desulfobacterium autotrophicum HRM2, complete genomeTuaH9e-36151
NC_013385:90331:9406394063952201158Ammonifex degensii KC4, complete genomeglycosyl transferase group 14e-35149
NC_014839:253961:2707942707942719541161Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceglycosyl transferase group 14e-32139
NC_013406:3329791:3338865333886533414652601Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 2 glycosyl transferase5e-32139
NC_016818:633750:6538036538036550111209Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeglycosyltransferase1e-31137
NC_010718:2513917:2542049254204925433531305Natranaerobius thermophilus JW/NM-WN-LF, complete genomehypothetical protein2e-31137
NC_015968:2975351:2984133298413329853321200Enterobacter asburiae LF7a chromosome, complete genomegroup 1 glycosyl transferase2e-30133
NC_013592:713036:7334547334547346621209Dickeya dadantii Ech586, complete genomeglycosyl transferase group 14e-29129
NC_004129:2234851:2253664225366422558532190Pseudomonas fluorescens Pf-5, complete genomeglycosyl transferase, group 2 family protein3e-27122
NC_011985:3892630:3922188392218839233271140Agrobacterium radiobacter K84 chromosome 1, complete genomeglycosyltransferase protein1e-26121
NC_014618:1752434:1768619176861917706822064Enterobacter cloacae SCF1 chromosome, complete genomefamily 2 glycosyl transferase2e-26120
NC_015726:2923969:2954310295431029553861077Cupriavidus necator N-1 chromosome 1, complete sequenceglycosyl transferase group 36e-26118
NC_009348:1475955:1501029150102915043403312Aeromonas salmonicida subsp. salmonicida A449, complete genomeglycosyl transferase, group 2 family protein1e-25117
NC_004129:2234851:2250514225051422525862073Pseudomonas fluorescens Pf-5, complete genomeglycosyl transferase, group 2 family protein7e-24111
NC_013093:1909305:1923276192327619253932118Actinosynnema mirum DSM 43827, complete genomeglycosyl transferase family 21e-21104
NC_016048:3667890:3697350369735036984321083Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein5e-21102
NC_013061:2247191:2258074225807422592671194Pedobacter heparinus DSM 2366, complete genomeglycosyl transferase group 11e-20101
NC_003366:332500:3503063503063515411236Clostridium perfringens str. 13, complete genomehypothetical protein1e-1998.2
NC_008261:304000:3216683216683229031236Clostridium perfringens ATCC 13124, complete genomeglycosyl transferase, group 1 family protein1e-1998.2
NC_008262:297960:3164083164083176431236Clostridium perfringens SM101, complete genometeichuronic acid biosynthesis glycosyl transferase, putative1e-1997.8
NC_013665:231023:2370312370312382211191Methanocella paludicola SANAE, complete genomehypothetical protein3e-1996.3
NC_011979:1590432:1615167161516716164771311Geobacter sp. FRC-32, complete genometeichuronic acid biosynthesis glycosyl transferase, putative2e-1790.9
NC_011060:244949:2510422510422522081167Pelodictyon phaeoclathratiforme BU-1, complete genomeglycosyl transferase group 14e-1789.4
NC_016112:3103716:3121644312164431227651122Methylomicrobium alcaliphilum chromosome, complete genomeglycosyl transferase family protein4e-1685.9
NC_008639:2786447:2814776281477628159421167Chlorobium phaeobacteroides DSM 266, complete genomeglycosyl transferase, group 18e-1685.1
NC_008261:304000:3242133242133256461434Clostridium perfringens ATCC 13124, complete genomeglycosyl transferase, group 1 family protein8e-1582
NC_009454:2663539:2688144268814426892921149Pelotomaculum thermopropionicum SI, complete genomeglycosyltransferase9e-1581.6
NC_008262:297960:3151063151063163891284Clostridium perfringens SM101, complete genometeichuronic acid biosynthesis glycosyl transferase, putative1e-1481.3
NC_008261:304000:3203663203663216491284Clostridium perfringens ATCC 13124, complete genomeglycosyl transferase, group 1 family protein1e-1481.3
NC_003366:332500:3490043490043502871284Clostridium perfringens str. 13, complete genomehypothetical protein1e-1481.3
NC_003366:332500:3528513528513542841434Clostridium perfringens str. 13, complete genomehypothetical protein4e-1479.3
NC_013061:2247191:2265893226589322671131221Pedobacter heparinus DSM 2366, complete genomeglycosyl transferase group 11e-1377.8
NC_008262:297960:3189533189533203861434Clostridium perfringens SM101, complete genometeichuronic acid biosynthesis glycosyl transferase, putative2e-1377.4
NC_015660:296488:3125613125613162323672Geobacillus thermoglucosidasius C56-YS93 chromosome, completefamily 2 glycosyl transferase2e-1377
NC_016935:3103430:312021031202103121208999Paenibacillus mucilaginosus 3016 chromosome, complete genomegroup 1 glycosyl transferase1e-1274.7
NC_015690:2553837:257068925706892571687999Paenibacillus mucilaginosus KNP414 chromosome, complete genomegroup 1 glycosyl transferase1e-1274.7
NC_014618:1752434:1770685177068517717761092Enterobacter cloacae SCF1 chromosome, complete genomeglycosyltransferase7e-1272
NC_013851:2441407:2448078244807824491961119Allochromatium vinosum DSM 180 chromosome, complete genomeglycosyltransferase2e-1170.5
NC_015565:2736500:2743609274360927447091101Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeglycosyltransferase4e-1169.3
NC_016047:3599095:3614882361488236160751194Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeputative teichuronic acid biosynthesis glycosyl transferase TuaH4e-1169.3
NC_011979:1590432:1616497161649716176181122Geobacter sp. FRC-32, complete genomehypothetical protein6e-1168.9
NC_018581:1180951:1198337119833711994311095Gordonia sp. KTR9 chromosome, complete genomeGlycosyltransferase4e-1066.2
NC_007644:626992:6941026941026969302829Moorella thermoacetica ATCC 39073, complete genomehypothetical protein6e-1065.5
NC_004129:2234851:2249414224941422505171104Pseudomonas fluorescens Pf-5, complete genomehypothetical protein9e-1065.1
NC_015563:1129469:1140235114023511433903156Delftia sp. Cs1-4 chromosome, complete genomefamily 2 glycosyl transferase1e-0964.3
NC_009921:7964128:7968528796852879697301203Frankia sp. EAN1pec, complete genomehypothetical protein3e-0963.2
NC_015663:4906652:4916810491681049195692760Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-0861.2
NC_015387:1803938:1831302183130218324801179Marinithermus hydrothermalis DSM 14884 chromosome, complete genomehypothetical protein5e-0755.8
NC_013851:2441407:2451538245153824538442307Allochromatium vinosum DSM 180 chromosome, complete genomemethyltransferase type 127e-0755.5
NC_012559:2663747:2683772268377226864532682Laribacter hongkongensis HLHK9, complete genomeWbmJ2e-0653.9
NC_015186:2063960:2062845206284520639631119Acidiphilium multivorum AIU301, complete genomeputative glycosyltransferase2e-0653.5