Pre_GI: BLASTP Hits

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Query: NC_004578:3193490:3198450 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3198450, End: 3199280, Length: 831

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005125:2107088:212765221276522128500849Gloeobacter violaceus PCC 7421, complete genomeThiJ family protein7e-55214
NC_012880:2480000:249500024950002495701702Dickeya dadantii Ech703, complete genomeThiJ/PfpI domain protein8e-46184
NC_008596:3404832:343870934387093439404696Mycobacterium smegmatis str. MC2 155, complete genomeisonitrile hydratase, putative2e-43176
NC_013956:1762171:177798017779801778675696Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein9e-43173
NC_010084:695817:699758699758700441684Burkholderia multivorans ATCC 17616 chromosome 1, completeThiJ/PfpI domain-containing protein5e-42171
NC_010804:2808676:282433228243322825015684Burkholderia multivorans ATCC 17616 chromosome 1, completeputative intracellular protease/amidase5e-42171
NC_011000:1023800:102931910293191030002684Burkholderia cenocepacia J2315 chromosome 1, complete sequenceDJ-1/PfpI family protein3e-41168
NC_009256:3056000:306906630690663069749684Burkholderia vietnamiensis G4 chromosome 1, complete sequenceThiJ/PfpI domain-containing protein1e-40167
NC_007492:2035761:205359520535952054281687Pseudomonas fluorescens PfO-1, complete genomeThiJ/PfpI1e-37156
NC_009832:4564752:458611045861104586943834Serratia proteamaculans 568, complete genomeThiJ/PfpI domain protein2e-37155
NC_011386:2762886:276951627695162770220705Oligotropha carboxidovorans OM5, complete genomeputative isonitrile hydratase7e-31134
NC_015684:1343251:135420913542091354913705Oligotropha carboxidovorans OM5 chromosome, complete genomeThiJ/PfpI domain-containing protein7e-31134
NC_017904:2724941:275344927534492754192744Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein9e-26117
NC_015850:110364:159869159869160393525Acidithiobacillus caldus SM-1 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-23109
NC_009255:351695:363357363357364211855Burkholderia vietnamiensis G4 chromosome 2, complete sequenceThiJ/PfpI domain-containing protein6e-22104
NC_009664:4423829:460808146080814608686606Kineococcus radiotolerans SRS30216, complete genomeThiJ/PfpI domain protein2e-21103
NC_016947:70210:743867438675027642Mycobacterium intracellulare MOTT-02 chromosome, complete genomeDJ-1/PfpI family protein4e-1995.1
NC_018524:4988810:500711850071185007759642Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeDJ-1/PfpI family protein1e-1894
NC_016109:327826:347961347961348593633Kitasatospora setae KM-6054, complete genomehypothetical protein4e-1892
NC_013440:8443451:845373184537318454354624Haliangium ochraceum DSM 14365, complete genomeThiJ/PfpI domain protein7e-1787.8
NC_007777:3000941:302074630207463021192447Frankia sp. CcI3, complete genomeThiJ/PfpI8e-1787.8
NC_014307:1855356:185757018575701858235666Ralstonia solanacearum CFBP2957 chromosome, complete genometranscriptional regulator protein, thij/pfpi4e-1685.1
NC_011000:2831183:283702428370242837785762Burkholderia cenocepacia J2315 chromosome 1, complete sequenceDJ-1/PfpI family protein2e-1582.8
NC_008740:3259962:326856632685663269267702Marinobacter aquaeolei VT8, complete genomeThiJ/PfpI domain protein3e-1582.4
NC_015514:2414617:243614924361492436748600Cellulomonas fimi ATCC 484 chromosome, complete genomeThiJ/PfpI domain-containing protein1e-1377
NC_014151:2312000:233071923307192331318600Cellulomonas flavigena DSM 20109 chromosome, complete genomeThiJ/PfpI domain protein2e-1273.2
NC_016745:2280375:228821122882112288795585Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein5e-1168.6
NC_016113:803268:8071748071748083401167Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator5e-1168.2
NC_017249:5255967:527970452797045280351648Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-1168.2
NC_002506:370629:406385406385406981597Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-1066.6
NC_009456:787322:845674845674846270597Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-1066.6
NC_012583:361241:417672417672418268597Vibrio cholerae O395 chromosome chromosome II, complete sequenceThiJ/PfpI2e-1066.6
NC_015588:1965787:198411819841181984717600Isoptericola variabilis 225 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-1066.6
NC_016945:370471:406223406223406801579Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-1066.6
NC_015671:1540860:154284915428491543448600Cellvibrio gilvus ATCC 13127 chromosome, complete genomeThiJ/PfpI domain-containing protein4e-1065.5
NC_017904:2724941:275248027524802753430951Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-0963.5
NC_010084:695817:700555700555701523969Burkholderia multivorans ATCC 17616 chromosome 1, completeAraC family transcriptional regulator2e-0963.2
NC_010804:2808676:282325028232502824218969Burkholderia multivorans ATCC 17616 chromosome 1, completeAraC subfamily transcriptional regulator2e-0963.2
NC_016010:637535:655721655721656488768Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintracellular protease/amidase7e-0961.2
NC_010162:8873051:8885884888588488869001017Sorangium cellulosum 'So ce 56', complete genomeAraC family transcriptional regulator2e-0859.7
NC_011000:1023800:1030077103007710310931017Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein2e-0859.7
NC_008782:1277117:129423112942311295220990Acidovorax sp. JS42, complete genometranscriptional regulator, AraC family2e-0859.7
NC_015580:1745918:175400517540051754982978Novosphingobium sp. PP1Y, complete genomeAraC family transcriptional regulator3e-0859.3
NC_017271:4193000:419482241948224195595774Xanthomonas campestris pv. raphani 756C chromosome, completeThiJ-PfpI family protein6e-0858.2
NC_009256:3056000:306798030679803068948969Burkholderia vietnamiensis G4 chromosome 1, complete sequencetranscriptional regulator9e-0857.8
NC_004369:531579:558983558983559948966Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-0757.4
NC_008369:939356:955788955788956390603Francisella tularensis subsp. holarctica OSU18, complete genomepossible transcriptional regulator1e-0757.4
NC_007880:935670:952099952099952701603Francisella tularensis subsp. holarctica, complete genomeDJ-1/PfpI family protein1e-0757.4
NC_009749:937412:953847953847954449603Francisella tularensis subsp. holarctica FTA, complete genomeDJ-1/PfpI family protein1e-0757.4
NC_003902:4252000:425336342533634253956594Xanthomonas campestris pv. campestris str. ATCC 33913, completeThiJ/PfpI family protein2e-0756.6
NC_010681:121647:1292811292811303451065Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family3e-0755.8
NC_021064:1705961:171849717184971719123627Propionibacterium avidum 44067, complete genomeThiJ/PfpI domain-containing protein3e-0755.8
NC_010688:673454:700564700564701337774Xanthomonas campestris pv. campestris, complete genomehypothetical protein4e-0755.5
NC_020064:1409596:143850214385021439464963Serratia marcescens FGI94, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain5e-0755.1
NC_012988:1777618:1803166180316618041881023Methylobacterium extorquens DM4, complete genomeAraC family transcriptional regulator2e-0653.1
NC_011757:1532047:153808115380811539046966Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family2e-0653.1
NC_008596:3404832:3437657343765734386701014Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, AraC family protein2e-0653.1
NC_007511:3103999:3107257310725731082731017Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family4e-0652.4
NC_004463:8401060:842551484255148426488975Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein9e-0650.8