Pre_GI: BLASTP Hits

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Query: NC_004578:2671508:2693952 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 2693952, End: 2695139, Length: 1188

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012721:2223641:2246713224671322479871275Burkholderia glumae BGR1 chromosome 2, complete genomeAcyl-CoA dehydrogenase3e-73275
NC_010296:2695186:2713846271384627150601215Microcystis aeruginosa NIES-843, complete genomeputative acyl-CoA dehydrogenase1e-72273
NC_011894:5056901:5088976508897650902231248Methylobacterium nodulans ORS 2060, complete genomeAcyl-CoA dehydrogenase type 2 domain protein3e-70265
NC_014841:41773:4177341773430261254Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceAcyl-CoA dehydrogenase type 2 domain protein6e-64244
NC_004578:2671508:2692713269271326939241212Pseudomonas syringae pv. tomato str. DC3000, complete genomeacyl-CoA dehydrogenase family protein4e-60232
NC_008027:3677500:3691965369196536931971233Pseudomonas entomophila L48, complete genomeacyl-CoA dehydrogenase5e-38158
NC_007509:644000:6440616440616452781218Burkholderia sp. 383 chromosome 3, complete sequenceAcyl-CoA dehydrogenase-like9e-32138
NC_009439:4734237:4750374475037447516031230Pseudomonas mendocina ymp, complete genomeacyl-CoA dehydrogenase type 24e-29129
NC_008596:4152916:4174286417428641755151230Mycobacterium smegmatis str. MC2 155, complete genomeacyl-CoA dehydrogenase domain protein3e-27122
NC_012856:737170:7916447916447928161173Ralstonia pickettii 12D chromosome 1, complete genomeAcyl-CoA dehydrogenase type 2 domain protein1e-25117
NC_018581:3871000:3889966388996638912041239Gordonia sp. KTR9 chromosome, complete genomeAcyl-CoA dehydrogenase1e-24114
NC_014306:1981956:1981956198195619831791224Erwinia billingiae Eb661, complete genomeAcyl-CoA dehydrogenase5e-24112
NC_008596:4152916:4170932417093241721431212Mycobacterium smegmatis str. MC2 155, complete genomeacyl-CoA dehydrogenase2e-22107
NC_008596:4152916:4159822415982241609791158Mycobacterium smegmatis str. MC2 155, complete genomeputative acyl-CoA dehydrogenase5e-22105
NC_010407:410918:4139694139694152041236Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative dehydrogenase2e-21103
NC_010407:410918:4152014152014163251125Clavibacter michiganensis subsp. sepedonicus chromosome, completehypothetical protein2e-21103
NC_007952:444616:4456324456324468461215Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative Acyl-CoA dehydrogenase9e-1271.6
NC_018604:2579000:2627023262702326281681146Brachyspira pilosicoli WesB complete genomeacyl-CoA dehydrogenase4e-1169.7
NC_019908:2068631:2070512207051220716571146Brachyspira pilosicoli P43/6/78 chromosome, complete genomeacyl-CoA dehydrogenase4e-1169.7
NC_018607:290500:2948092948092959541146Brachyspira pilosicoli B2904 chromosome, complete genomeacyl-CoA dehydrogenase4e-1169.7
NC_014330:1113145:1145717114571711468201104Brachyspira pilosicoli 95/1000 chromosome, complete genomeacyl-CoA dehydrogenase4e-1169.3
NC_016885:2294000:2314557231455723157711215Pyrobaculum oguniense TE7 chromosome, complete genomeacyl-CoA dehydrogenase1e-1067.8
NC_009617:3360990:3365306336530633664451140Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein3e-0963.5
NC_012225:2198987:2200868220086822019711104Brachyspira hyodysenteriae WA1, complete genomeacyl-CoA dehydrogenase4e-0963.2
NC_017243:3141500:3158750315875031598951146Brachyspira intermedia PWS/A chromosome, complete genomeacyl-CoA dehydrogenase4e-0962.8
NC_021171:1689518:1693913169391316950521140Bacillus sp. 1NLA3E, complete genomeacyl-CoA dehydrogenase short-chain specific6e-0962.4
NC_015064:1021483:1028090102809010298801791Acidobacterium sp. MP5ACTX9 chromosome, complete genomeMethyltransferase type 115e-0859.3
NC_013744:462520:4653924653924665521161Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeacyl-CoA dehydrogenase domain protein4e-0859.3
NC_015660:3467579:3490539349053934917411203Geobacillus thermoglucosidasius C56-YS93 chromosome, completeacyl-CoA dehydrogenase domain-containing protein8e-0858.5
NC_013791:2273389:2276424227642422775691146Bacillus pseudofirmus OF4 chromosome, complete genomebutyryl-CoA dehydrogenase2e-0757.4
NC_017179:1133510:1137839113783911389751137Clostridium difficile BI1, complete genomebutyryl-CoA dehydrogenase2e-0757.4
NC_013315:1123733:1128062112806211291981137Clostridium difficile CD196 chromosome, complete genomebutyryl-CoA dehydrogenase2e-0757.4
NC_009523:585367:6077476077476089371191Roseiflexus sp. RS-1 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein2e-0757
NC_015677:1460000:1477348147734814785111164Ramlibacter tataouinensis TTB310 chromosome, complete genomebutyryl-CoA dehydrogenase2e-0757
NC_003454:2080705:2090185209018520920951911Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeACYL-COA dehydrogenase, short-chain specific2e-0757
NC_011891:2800000:2800179280017928021191941Anaeromyxobacter dehalogenans 2CP-1, complete genomeacyl-CoA dehydrogenase domain protein3e-0756.6
NC_015948:1636491:1640297164029716414541158Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeacyl-CoA dehydrogenase4e-0756.2
NC_021150:3200959:3215238321523832164281191Azotobacter vinelandii CA6, complete genomeAcyl-CoA dehydrogenase family protein5e-0755.8
NC_012560:3200961:3215240321524032164301191Azotobacter vinelandii DJ, complete genomeAcyl-CoA dehydrogenase family protein5e-0755.8
NC_015593:158107:1905011905011916341134Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeButyryl-CoA dehydrogenase4e-0652.8
NC_009485:3461051:3461051346105134622351185Bradyrhizobium sp. BTAi1 chromosome, complete genomeacyl-CoA dehydrogenase4e-0652.8
NC_014118:1592000:1620393162039316215771185Burkholderia sp. CCGE1002 chromosome chromosome 2, completeAcyl-CoA dehydrogenase type 2 domain protein7e-0652