Pre_GI: BLASTP Hits

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Query: NC_004578:20738:39345 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 39345, End: 40082, Length: 738

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:1:327453274533497753Pseudomonas denitrificans ATCC 13867, complete genomeSer/Thr protein phosphatase family protein3e-85315
NC_010322:5349000:537278953727895373517729Pseudomonas putida GB-1 chromosome, complete genomemetallophosphoesterase6e-63240
NC_009659:3384997:340367634036763404458783Janthinobacterium sp. Marseille chromosome, complete genomemetallophosphoesterase8e-45180
NC_010682:3033646:304104930410493041825777Ralstonia pickettii 12J chromosome 1, complete sequencemetallophosphoesterase2e-44179
NC_010682:1763769:178032917803291781105777Ralstonia pickettii 12J chromosome 1, complete sequencemetallophosphoesterase2e-44179
NC_008576:2458573:247372424737242474482759Magnetococcus sp. MC-1, complete genomemetallophosphoesterase3e-43175
NC_012587:2298324:231220923122092312973765Rhizobium sp. NGR234, complete genomeputative phosphoesterase1e-42173
NC_008380:2287327:230202823020282302795768Rhizobium leguminosarum bv. viciae 3841, complete genomeputative phosphatase6e-40164
NC_006350:845513:874574874574875362789Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phosphoesterase5e-40164
NC_008700:367949:374607374607375368762Shewanella amazonensis SB2B, complete genomephosphoesterase, related to the Icc protein8e-40163
NC_013422:991500:101660110166011017401801Halothiobacillus neapolitanus c2, complete genomemetallophosphoesterase2e-38159
NC_018000:4958637:499384249938424994609768Sinorhizobium fredii USDA 257 chromosome, complete genomephosphoesterase3e-38158
NC_015138:2364500:237940023794002380230831Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completemetallophosphoesterase3e-37155
NC_011004:4073916:407474240747424075620879Rhodopseudomonas palustris TIE-1, complete genomemetallophosphoesterase8e-37154
NC_016616:3585435:359924535992453600021777Dechlorosoma suillum PS chromosome, complete genomeputative phosphohydrolase1e-35149
NC_011758:326366:3471203471203483941275Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completemetallophosphoesterase7e-35147
NC_007958:4985:237932379324572780Rhodopseudomonas palustris BisB5, complete genomemetallophosphoesterase3e-33142
NC_004578:5336773:539524353952435395767525Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-33140
NC_014541:4167916:417915141791514179948798Ferrimonas balearica DSM 9799 chromosome, complete genomemetallophosphoesterase9e-32137
NC_009667:1203861:122035712203571221190834Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencemetallophosphoesterase4e-28124
NC_015850:1155376:116184311618431162649807Acidithiobacillus caldus SM-1 chromosome, complete genomemetallophosphoesterase4e-28124
NC_007964:4157500:415823341582334158997765Nitrobacter hamburgensis X14, complete genomemetallophosphoesterase2e-26119
NC_015850:1155376:115766611576661158433768Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phosphatase4e-26118
NC_009667:2860818:287595328759532876807855Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencemetallophosphoesterase6e-26117
NC_010814:1441327:146667214666721467463792Geobacter lovleyi SZ, complete genomemetallophosphoesterase1e-24113
NC_009468:38112:577595775958571813Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequencemetallophosphoesterase4e-23108
NC_015160:2145915:214977221497722150539768Odoribacter splanchnicus DSM 20712 chromosome, complete genomemetallophosphoesterase1e-21103
NC_013222:229190:236228236228236992765Robiginitalea biformata HTCC2501, complete genomehypothetical protein4e-1581.6
NC_009138:2110500:211105021110502111484435Herminiimonas arsenicoxydans, complete genomePutative phosphoesterase (partial)4e-1478.2
NC_016609:8772011:877654387765438777337795Niastella koreensis GR20-10 chromosome, complete genomemetallophosphoesterase2e-1272.4
NC_008255:3331613:335204533520453352686642Cytophaga hutchinsonii ATCC 33406, complete genomehypothetical protein7e-1271.2
NC_009138:2110500:211065421106542111016363Herminiimonas arsenicoxydans, complete genomePutative phosphoesterase (partial)1e-1067
NC_011758:326366:3459163459163469321017Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completemetallophosphoesterase2e-0962.4
NC_015633:2801321:281854528185452819321777Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-0859.3