Pre_GI: BLASTP Hits

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Query: NC_004547:611178:615469 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 615469, End: 615948, Length: 480

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:2587756:2591672259167225926881017Photorhabdus asymbiotica, complete genomesimilar to putative tail fiber protein1e-24112
NC_016831:947281:9747529747529765901839Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1891.7
NC_011205:2180598:2193744219374421955821839Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853pilin2e-1891.7
NC_013508:2587913:2596267259626725984232157Edwardsiella tarda EIB202, complete genomeputative tail fiber protein9e-1785.9
NC_012880:2480000:248256224825622483113552Dickeya dadantii Ech703, complete genomeTail Collar domain protein3e-1477.8
NC_020181:5130513:5173329517332951748041476Enterobacter aerogenes EA1509E, complete genomePhage tail fiber protein5e-1477
NC_014500:177824:1893301893301907901461Dickeya dadantii 3937 chromosome, complete genomeTail fiber protein1e-1375.5
NC_020064:871338:8878098878098888491041Serratia marcescens FGI94, complete genomephage-related tail fiber protein3e-1374.3
NC_014306:103545:1299871299871311021116Erwinia billingiae Eb661, complete genomePhage Tail Collar domain protein5e-1270.1
NC_008563:2909945:292099529209952921489495Escherichia coli APEC O1, complete genomeputative tail fiber protein8e-1269.7
NC_007946:2894793:290748229074822908225744Escherichia coli UTI89, complete genomehypothetical protein8e-1269.3
NC_011742:2823000:283981928398192840562744Escherichia coli S88 chromosome, complete genomephage tail protein8e-1269.3
NC_000913:1188999:120834212083421208878537Escherichia coli K12, complete genomee14 prophage; predicted side tail fiber protein fragment (pseudogene)2e-1168.2
AC_000091:1191353:121069612106961211232537Escherichia coli W3110 DNA, complete genome2e-1168.2
NC_014562:1698253:1720013172001317210591047Pantoea vagans C9-1 chromosome, complete genomeProbable tail fiber protein (GpH)3e-1167.8
NC_012962:2587756:258977225897722590722951Photorhabdus asymbiotica, complete genomesc/svq protein2e-1064.7
NC_006300:60484:772687726878158891Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein3e-1064.3
NC_002967:1166965:1169950116995011715331584Treponema denticola ATCC 35405, complete genometail fiber domain protein6e-1063.2
NC_012846:986877:1013486101348610144991014Bartonella grahamii as4aup, complete genomeputative phage tail fiber protein4e-0857
NC_005815:61148:2928292858642937Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completephage lambda-related protein3e-0754.3
NC_013353:604719:6088486088486117632916Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein9e-0649.3
AP010958:604719:6088486088486117632916Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein9e-0649.3
NC_011415:644811:6490376490376520032967Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-0549.3