Pre_GI: BLASTP Hits

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Query: NC_004547:442927:469396 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 469396, End: 472884, Length: 3489

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:3355814:3378046337804633815313486Cronobacter sakazakii Sp291, complete genomehypothetical protein02023
NC_012526:765000:7905287905287943193792Deinococcus deserti VCD115, complete genomehypothetical protein3e-70267
NC_017986:5867782:5874074587407458776043531Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-52209
NC_010498:4072681:4082773408277340854932721Escherichia coli SMS-3-5, complete genomehypothetical protein3e-1275.1
NC_008322:1186000:1199709119970912011421434Shewanella sp. MR-7, complete genomehypothetical protein6e-1170.9
NC_012673:2535427:2566208256620825691832976Exiguobacterium sp. AT1b, complete genomehypothetical protein2e-1069.3
NC_013410:1591500:1607735160773516104312697Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein3e-0965.1
NC_009617:3263413:3269030326903032704661437Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein7e-0963.9
NC_007520:407627:4215274215274229721446Thiomicrospira crunogena XCL-2, complete genomehypothetical protein2e-0862
NC_015224:4426167:4435170443517044376712502Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-0862
NC_020541:2694836:2705471270547127069011431Rhodanobacter sp. 2APBS1, complete genomehypothetical protein6e-0757.4
NC_008596:1302000:1354095135409513556331539Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein1e-0656.2
NC_015674:1114915:1122144112214411244952352Helicobacter bizzozeronii CIII-1, complete genomehypothetical protein2e-0656.2
NC_002927:506183:5160365160365174691434Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-0656.2
NC_010501:3671517:3703093370309337045411449Pseudomonas putida W619, complete genomehypothetical protein2e-0655.8
NC_007925:138927:159795159795160622828Rhodopseudomonas palustris BisB18, complete genomeNAD-dependent protein deacetylases, SIR2 family2e-0655.5
NC_015381:2859000:2906549290654929079971449Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein3e-0655.1
NC_013739:2106662:212315321231532124025873Conexibacter woesei DSM 14684, complete genomehypothetical protein4e-0654.7
NC_012793:1718000:1729792172979217312941503Geobacillus sp. WCH70, complete genomehypothetical protein7e-0653.9
NC_010688:4991410:500375450037545004611858Xanthomonas campestris pv. campestris, complete genomeSir2-like protein8e-0653.5