Pre_GI: BLASTP Hits

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Query: NC_004547:3207776:3217207 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 3217207, End: 3220539, Length: 3333

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008758:143907:1484161484161517513336Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeputative ATP-binding protein01290
NC_014394:738365:7392007392007425293330Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein01217
NC_011662:2374955:2389933238993323925872655Thauera sp. MZ1T, complete genomeputative ATP-binding protein01019
NC_008825:1258500:1265095126509512684273333Methylibium petroleiphilum PM1, complete genomeputative ATP-binding protein0913
NC_013956:595320:6047126047126075042793Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-179629
NC_016613:1159980:1163360116336011667223363Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein1e-117424
NC_011138:105196:1223941223941256273234Alteromonas macleodii 'Deep ecotype', complete genomeputative ATP-binding protein6e-111402
NC_011961:85083:9116291162944883327Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencehypothetical protein4e-102373
NC_018870:1695588:1719501171950117229053405Thermacetogenium phaeum DSM 12270 chromosome, complete genomehypothetical protein2e-72275
NC_015573:569625:5782065782065816073402Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein2e-71271
NC_013929:3722867:3756357375635737598453489Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein9e-67256
NC_008596:1302000:1316779131677913202373459Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein7e-66253
NC_013595:9547254:9573901957390195775183618Streptosporangium roseum DSM 43021, complete genomehypothetical protein5e-64247
NC_016610:3297080:3293874329387432970833210Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein1e-60235
NC_013093:626473:6493686493686529463579Actinosynnema mirum DSM 43827, complete genomehypothetical protein2e-60234
NC_013222:615948:6412206412206444533234Robiginitalea biformata HTCC2501, complete genomehypothetical protein1e-51205
NC_018748:3187233:3184031318403131872553225Emticicia oligotrophica DSM 17448 chromosome, complete genomehypothetical protein4e-51204
NC_015564:2870631:2890641289064128940363396Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomehypothetical protein6e-51203
NC_009441:3562125:3562125356212535653403216Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein1e-50202
NC_014033:1215790:1231114123111412343383225Prevotella ruminicola 23 chromosome, complete genomehypothetical protein5e-44180
NC_017059:2491924:2504916250491625081253210Rhodospirillum photometricum DSM 122, complete genomehypothetical protein6e-38160
NC_013410:2037840:2047233204723320508773645Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein1e-29132
NC_016935:7872425:7894974789497478984683495Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-23112