Pre_GI: BLASTP Hits

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Query: NC_004547:2285092:2300401 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2300401, End: 2301204, Length: 804

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:3151458:315489431548943155712819Serratia marcescens WW4, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein3e-67255
NC_006371:1973500:197778219777821978603822Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein3e-45182
NC_014664:1360524:1364037136403713651341098Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeSiderophore-interacting protein4e-24111
NC_014118:1083492:109724810972481098084837Burkholderia sp. CCGE1002 chromosome chromosome 2, completeFAD-binding 9 siderophore-interacting domain protein9e-24110
NC_010515:1491590:150734415073441508165822Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceFAD-binding 9 siderophore-interacting domain protein7e-21101
NC_009075:15017:199041990420731828Burkholderia pseudomallei 668 chromosome II, complete sequencesiderophore-interacting protein7e-1994.4
NC_010170:4196197:420397342039734204797825Bordetella petrii, complete genomeiron utilization protein3e-1582
NC_016624:112919:1292671292671303701104Azospirillum lipoferum 4B plasmid AZO_p5, complete sequencesiderophore-interacting protein5e-1478.2
NC_013093:2633000:266036126603612661191831Actinosynnema mirum DSM 43827, complete genomeSiderophore-interacting protein7e-1477.8
NC_015947:444466:446203446203447000798Burkholderia sp. JV3 chromosome, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein3e-1375.9
NC_011071:429204:431753431753432550798Stenotrophomonas maltophilia R551-3, complete genomeSiderophore-interacting protein7e-1374.3
NC_013947:3080290:308175230817523082579828Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein2e-1273.2
NC_009436:3807420:382408638240863824850765Enterobacter sp. 638, complete genomeFAD-binding 9, siderophore-interacting domain-containing protein3e-1272.4
NC_010943:493002:496261496261497058798Stenotrophomonas maltophilia K279a, complete genomeputative siderophore-interacting protein8e-1271.2
NC_004578:4708220:472364247236424724409768Pseudomonas syringae pv. tomato str. DC3000, complete genomeiron utilization protein, putative8e-1270.9
NC_012669:96966:119240119240120073834Beutenbergia cavernae DSM 12333, complete genomeSiderophore-interacting protein2e-1169.7
NC_013353:3853082:389136438913643892128765Escherichia coli O103:H2 str. 12009, complete genomesiderophore interacting protein1e-1067.4
AP010958:3853082:389136438913643892128765Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted siderophore interacting protein1e-1067.4
NC_014550:301894:307299307299308183885Arthrobacter arilaitensis Re117, complete genomeputative siderophore-interacting protein2e-1066.2
NC_015671:139892:1410421410421420521011Cellvibrio gilvus ATCC 13127 chromosome, complete genomeSiderophore-interacting protein3e-1065.9
NC_015514:3307199:330975033097503310613864Cellulomonas fimi ATCC 484 chromosome, complete genomeSiderophore-interacting protein5e-1065.1
NC_008463:3394000:341039534103953411303909Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative siderophore-interacting protein7e-1064.7
NC_002516:2222896:222289622228962223804909Pseudomonas aeruginosa PAO1, complete genomehypothetical protein6e-1064.7
NC_011770:3626000:364201936420193642927909Pseudomonas aeruginosa LESB58, complete genomeputative siderophore-interacting protein1e-0963.9
NC_009921:3551036:3576191357619135780621872Frankia sp. EAN1pec, complete genomeSiderophore-interacting protein4e-0962
NC_008027:3953951:395395139539513954883933Pseudomonas entomophila L48, complete genomesiderophore interacting protein5e-0961.6
NC_009654:3980289:399013939901393990945807Marinomonas sp. MWYL1, complete genomeFAD-binding 9 siderophore-interacting domain-containing protein2e-0860.1
NC_010545:1781393:178336117833611784227867Corynebacterium urealyticum DSM 7109, complete genomeputative siderophore-interacting protein1e-0757
NC_006361:2534192:253419225341922534926735Nocardia farcinica IFM 10152, complete genomehypothetical protein2e-0653.5