Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1194710 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1194710, End: 1195108, Length: 399

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:3421500:343043134304313430814384Dickeya dadantii Ech703, complete genomehypothetical protein1e-40164
NC_009436:3117661:313781431378143138128315Enterobacter sp. 638, complete genomehypothetical protein1e-34144
NC_011283:4438500:445597944559794456392414Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-28124
NC_013941:3300000:332635433263543326755402Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein9e-28122
NC_009792:3245368:327774532777453278182438Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-27119
NC_012917:1840172:186270218627021863139438Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-25113
NC_009792:3665369:368216536821653682593429Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-25112
NC_009801:2898426:292365429236542924058405Escherichia coli E24377A, complete genomehypothetical protein3e-24110
CU928160:4570498:458912245891224589562441Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein3e-23107
NC_011741:4570498:458912245891224589562441Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-23107
NC_012125:4716000:473015347301534730485333Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-23106
NC_013971:73037:869858698587341357Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein4e-22103
NC_008800:1090000:110731611073161107732417Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative ATP/GTP-binding protein5e-22102
NC_010067:191190:208147208147208398252Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1582
NC_011094:2791719:280775428077542807978225Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1373.6
NC_013971:73037:891298912989521393Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein5e-0959.7