Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1191839 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1191839, End: 1192258, Length: 420

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016816:1545354:155497415549741555378405Pantoea ananatis LMG 5342, complete genomehypothetical protein5e-24109
NC_012917:1840172:185489918548991855315417Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein8e-1992.4
NC_010067:191190:204775204775205179405Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1786.3
NC_009436:3117661:314076231407623141148387Enterobacter sp. 638, complete genomehypothetical protein1e-1684.7
NC_009524:1369395:137739913773991377815417Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein2e-1684.7
CU928160:4570498:458573545857354586121387Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-1684.3
NC_011741:4570498:458573545857354586121387Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-1684.3
NC_008800:1090000:110376511037651104169405Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-1477
NC_013941:3300000:333160233316023332000399Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein8e-1475.9
NC_002695:3468873:349387034938703494268399Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-1475.9
NC_009792:3665369:368553836855383685936399Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1271.6
NC_013421:1819036:185362218536221854020399Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-1271.6
NC_020829:636773:646604646604647044441Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein9e-1165.5
NC_011283:4438500:445920544592054459609405Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-1065.1
NC_010322:583842:594321594321594785465Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein3e-0960.5
NC_014752:834616:847842847842848252411Neisseria lactamica ST-640, complete genomehypothetical protein2e-0857.8
NC_015563:2018038:202842220284222028880459Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein4e-0857
NC_003919:3396136:340610134061013406553453Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-0754.7
NC_012880:3421500:343493134349313435314384Dickeya dadantii Ech703, complete genomehypothetical protein3e-0753.9
NC_004578:5192110:520069552006955201093399Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-0753.5
NC_020829:940692:987323987323987727405Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-0651.2
NC_005773:4899252:490673649067364907134399Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein3e-0650.4