Pre_GI: BLASTP Hits

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Query: NC_004463:1992000:2042312 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2042312, End: 2043697, Length: 1386

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014650:2500817:2511401251140125128101410Geobacillus sp. Y4.1MC1 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-78293
NC_008010:200796:2067502067502080361287Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceextracellular solute-binding protein, family 13e-34146
NC_019974:1184871:1227675122767512290481374Natronococcus occultus SP4, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family5e-30132
NC_008149:2517538:2520200252020025214681269Yersinia pestis Nepal516, complete genomeexported solute-binding protein6e-26119
NC_015145:1045264:1078367107836710797191353Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family6e-23108
NC_014212:3091571:3099872309987231012211350Meiothermus silvanus DSM 9946 chromosome, complete genomeextracellular solute-binding protein family 11e-1894.7
NC_012660:2684981:2688291268829126896011311Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transporter-like exported protein5e-1892.4
NC_010524:933191:9517829517829530891308Leptothrix cholodnii SP-6, complete genomeextracellular solute-binding protein family 18e-1892
NC_007492:2994036:3021803302180330231131311Pseudomonas fluorescens PfO-1, complete genomeextracellular solute-binding protein, family 12e-1790.9
NC_015856:1271295:1289565128956512909831419Collimonas fungivorans Ter331 chromosome, complete genomeABC sugar transporter, periplasmic ligand binding protein2e-1687.8
NC_015137:2616222:2639997263999726413341338Burkholderia sp. CCGE1001 chromosome 2, complete sequencefamily 1 extracellular solute-binding protein1e-1584.7
NC_014010:1020488:1020488102048810217921305Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeperiplasmic sorbitol-binding protein, putative3e-1583.6
NC_014221:3137952:3147241314724131485541314Truepera radiovictrix DSM 17093 chromosome, complete genomeextracellular solute-binding protein family 15e-1479.3
NC_015138:4666544:4687186468718646885231338Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 1 extracellular solute-binding protein1e-1378.2
NC_008027:2051821:2072028207202820733381311Pseudomonas entomophila L48, complete genomemannitol ABC transporter, periplasmic mannitol-binding protein3e-1377
NC_018644:516157:5259355259355272391305Alpha proteobacterium HIMB59 chromosome, complete genomeextracellular solute-binding protein3e-1376.6
NC_021182:966839:9705849705849718611278Clostridium pasteurianum BC1, complete genomeABC-type sugar transport system, periplasmic component1e-1274.7
NC_014532:1713987:1728058172805817293681311Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein3e-1273.6
NC_018644:210627:2203982203982219151518Alpha proteobacterium HIMB59 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family5e-1272.8
NC_008699:3896816:3905693390569339069911299Nocardioides sp. JS614, complete genomeextracellular solute-binding protein, family 12e-1170.9
NC_017219:391100:3969663969663983541389Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative ABC transporter substrate binding component9e-1065.5
NC_011593:391297:3971513971513985601410Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,family 1 extracellular solute-binding protein9e-1065.5
NC_016641:2618587:2645924264592426471771254Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0962.8
NC_012926:140000:1543541543541556281275Streptococcus suis BM407 chromosome, complete genomeextracellular solute-binding lipoprotein2e-0860.8
NC_012924:142500:1543751543751556491275Streptococcus suis SC84, complete genomeextracellular solute-binding lipoprotein2e-0860.8
NC_012925:140000:1545701545701558441275Streptococcus suis P1/7, complete genomeextracellular solute-binding lipoprotein2e-0860.8
NC_009443:142500:1541291541291555561428Streptococcus suis 98HAH33, complete genomesugar ABC transporter periplasmic protein2e-0860.5
NC_015436:270820:2858702858702871261257Spirochaeta coccoides DSM 17374 chromosome, complete genomeextracellular solute-binding protein family 14e-0859.7
NC_016935:2567039:2601872260187226032001329Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein4e-0859.7
NC_015690:2039215:2052584205258420539121329Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein6e-0859.3
NC_011899:86800:9030190301915361236Halothermothrix orenii H 168, complete genomeextracellular solute-binding protein family 11e-0758.2
NC_016935:1365463:1401104140110414027501647Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-0756.6
NC_015690:3941113:3981668398166839833141647Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0756.2
NC_014364:2246524:2258344225834422596421299Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 19e-0755.5
NC_016516:1751336:1753605175360517549181314Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeextracellular solute-binding protein2e-0653.9