Pre_GI: BLASTP Hits

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Query: NC_004463:1749000:1767237 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1767237, End: 1768103, Length: 867

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:8483159:848315984831598484025867Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-168592
NC_009485:7827782:7849312784931278509641653Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein3e-53208
NC_009445:467682:4962524962524993923141Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein1e-26120
NC_017249:908500:9391289391289422383111Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-25114
NC_007958:830000:8561528561528588692718Rhodopseudomonas palustris BisB5, complete genomeGGDEF domain2e-1583.6
NC_014532:2989185:3003902300390230078433942Halomonas elongata DSM 2581, complete genomeprobable two-component sensor6e-1581.3
NC_014834:959986:9958759958759985862712Rhodopseudomonas palustris DX-1 chromosome, complete genomediguanylate cyclase/phosphodiesterase1e-1377.4
NC_004463:2475428:2475428247542824779292502Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator8e-1064.7
NC_008700:3692333:3711339371133937150493711Shewanella amazonensis SB2B, complete genomesensory box histidine kinase/response regulator5e-0962
NC_007626:3522265:3613896361389636184284533Magnetospirillum magneticum AMB-1, complete genomeHypothetical 1041 kDa protein in hypE 3'region3e-0859.3
NC_009092:3057319:3080597308059730840973501Shewanella loihica PV-4, complete genomeintegral membrane sensor hybrid histidine kinase2e-0757
NC_007794:2839239:2843398284339828467483351Novosphingobium aromaticivorans DSM 12444, complete genomemulti-sensor hybrid histidine kinase4e-0755.5
NC_017059:2084500:2087696208769620909383243Rhodospirillum photometricum DSM 122, complete genomeSensor protein5e-0755.5
NC_004129:2440744:2462447246244724650982652Pseudomonas fluorescens Pf-5, complete genomesensory box histidine kinase/response regulator1e-0654.3
NC_011312:3060371:3063960306396030674063447Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completemembrane associated response regulator, histidine kinase1e-0653.9
NC_018012:1076839:1097004109700411013204317Thiocystis violascens DSM 198 chromosome, complete genomePAS domain-containing protein6e-0651.6