Pre_GI: BLASTP Hits

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Query: NC_004461:779000:788650 Staphylococcus epidermidis ATCC 12228, complete genome

Start: 788650, End: 789189, Length: 540

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a non-biofilm-forming, non-infection associated strain used for detection of residual antibiotics in food products. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. Has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Resistant to many antibiotics including penicillins and cephalosporins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020134:1328302:133941313394131339952540Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative DNA-binding protein5e-33140
NC_016630:1385719:139310813931081393626519Filifactor alocis ATCC 35896 chromosome, complete genomeCro/CI family transcriptional regulator3e-27120
NC_009718:1411793:143010814301081430635528Fervidobacterium nodosum Rt17-B1, complete genomecupin 2 domain-containing protein2e-22105
NC_013939:1535071:155165715516571552193537Deferribacter desulfuricans SSM1, complete genomeXRE family transcriptional regulator2e-1685.1
NC_010175:2925084:294094629409462941581636Chloroflexus aurantiacus J-10-fl, complete genomeCupin 2 conserved barrel domain protein1e-1582.4
NC_012032:2925000:293613129361312936766636Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, XRE family1e-1582.4
NC_007907:4859735:487593148759314876476546Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1582.4
NC_006510:2910000:291967829196782920220543Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-1375.5
NC_011144:2770842:278904627890462789666621Phenylobacterium zucineum HLK1, complete genometranscriptional regulator, Cro/CI family1e-1272.8
NC_014640:5047201:504847650484765049030555Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein2e-1272
NC_017273:352150:357368357368357946579Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completecupin2e-1271.6
NC_014010:1850500:188064418806441881270627Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA-binding protein5e-1270.5
NC_014118:2417838:242979424297942430366573Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, XRE family2e-1168.6
NC_014960:1697818:171901417190141719634621Anaerolinea thermophila UNI-1, complete genomehypothetical protein4e-1167.4
NC_010511:4313769:431666343166634317268606Methylobacterium sp. 4-46 chromosome, complete genomeXRE family transcriptional regulator7e-1166.6
NC_014328:1286407:130205613020561302601546Clostridium ljungdahlii ATCC 49587 chromosome, complete genometranscriptional regulator1e-1066.2
NC_012791:2386000:239303923930392393611573Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family3e-1064.7
NC_016048:3856665:387693238769323877567636Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein3e-1064.7
NC_016025:552000:561697561697562284588Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative transcriptional regulator6e-1063.9
NC_009659:997779:100550010055001006123624Janthinobacterium sp. Marseille chromosome, complete genomeCro/CI family transcriptional regulator1e-0963.2
NC_012792:627500:634865634865635437573Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family2e-0962
NC_012108:946314:962372962372962944573Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (Cro/CI family protein)3e-0961.2
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor4e-0960.8
NC_007907:4859735:487526948752694875916648Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-0960.5
NC_015727:764744:769843769843770589747Cupriavidus necator N-1 plasmid BB1p, complete sequenceCro/CI family transcriptional regulator protein2e-0858.9
NC_012808:2886282:289424728942472894843597Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, XRE family3e-0858.2
NC_006350:1084930:108965110896511090214564Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DNA-binding protein4e-0857.4
NC_004129:2609189:261369426136942614242549Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein4e-0857.4
NC_015172:1195782:120453112045311204860330Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehelix-turn-helix domain protein8e-0856.6
NC_009617:4805413:480886648088664809417552Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeXRE family transcriptional regulator1e-0756.2
NC_004557:1553000:155369415536941554401708Clostridium tetani E88, complete genomeputative transcriptional regulatory protein2e-0755.5
NC_010424:697187:744858744858745595738Candidatus Desulforudis audaxviator MP104C, complete genomeputative prophage repressor3e-0754.7
NC_014136:329484:330462330462330773312Leuconostoc kimchii IMSNU11154 chromosome, complete genometranscription regulator4e-0754.3
NC_014532:3596097:361884336188433619433591Halomonas elongata DSM 2581, complete genomeprobable transcriptional regulator4e-0754.3
NC_014532:2108897:211584221158422116432591Halomonas elongata DSM 2581, complete genomeprobable transcriptional regulator4e-0754.3
NC_011757:517000:548476548476549072597Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, XRE family4e-0754.3
NC_014306:3210311:323155932315593232116558Erwinia billingiae Eb661, complete genomeTranscriptional regulator4e-0754.3
NC_016818:3736213:375836837583683758922555Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator4e-0754.3
NC_013716:357928:389831389831390388558Citrobacter rodentium ICC168, complete genometranscriptional regulator of the polyamine metabolism genes6e-0753.9
NC_014654:2311818:232518923251892325725537Halanaerobium sp. 'sapolanicus' chromosome, complete genomeCupin 2 conserved barrel domain protein7e-0753.5
NC_016048:2907702:293945829394582940024567Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein7e-0753.5
NC_014618:1809369:183324018332401833797558Enterobacter cloacae SCF1 chromosome, complete genomecupin8e-0753.1
NC_013406:3650300:365837636583763658936561Paenibacillus sp. Y412MC10 chromosome, complete genomeXRE family transcriptional regulator1e-0652.8
NC_007907:4956500:498991149899114990465555Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0652.8
NC_007644:1638083:166268516626851663587903Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family1e-0652.4
NC_015500:900807:900807900807901394588Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein2e-0652.4
NC_015573:1979202:199861019986101999377768Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0652
NC_014328:2518081:253808325380832538637555Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-0652
NC_016002:2652500:265727326572732657857585Pseudogulbenkiania sp. NH8B, complete genomeXRE family transcriptional regulator2e-0652
NC_015276:2769000:277194627719462772557612Marinomonas mediterranea MMB-1 chromosome, complete genomehelix-turn-helix domain protein3e-0651.2
NC_016584:5388500:541244654124465412778333Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator3e-0651.2
UCMB5137:1:101211012110666546Bacillus atrophaeus UCMB-5137unknown3e-0651.2
NC_007626:1863747:187817018781701878664495Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator4e-0650.8