Pre_GI: BLASTP Hits

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Query: NC_004432:32500:46920 Mycoplasma penetrans HF-2, complete genome

Start: 46920, End: 47795, Length: 876

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013729:5497814:5516783551678355177931011Kribbella flavida DSM 17836, complete genomechromosome segregation and condensation protein ScpA6e-1271.6
NC_013521:2193203:2213440221344022144681029Sanguibacter keddieii DSM 10542, complete genomecondensin subunit ScpA9e-1270.9
NC_015558:1485762:150847115084711509175705Streptococcus parauberis KCTC 11537 chromosome, complete genomesegregation and condensation protein A3e-1169.3
NC_014391:2579919:2580884258088425819721089Micromonospora aurantiaca ATCC 27029 chromosome, complete genomechromosome segregation and condensation protein ScpA1e-1067.4
NC_014329:1041556:104646310464631047281819Corynebacterium pseudotuberculosis FRC41 chromosome, completesegregation and condensation protein2e-1066.2
NC_016781:1039716:104645410464541047272819Corynebacterium pseudotuberculosis 3/99-5 chromosome, completesegregation and condensation protein A2e-1066.2
NC_017031:1039548:104628610462861047104819Corynebacterium pseudotuberculosis P54B96 chromosome, completesegregation and condensation protein A2e-1066.2
NC_017301:1037519:104609910460991046917819Corynebacterium pseudotuberculosis C231 chromosome, completesegregation and condensation protein A2e-1066.2
NC_017303:1039562:104630010463001047118819Corynebacterium pseudotuberculosis I19 chromosome, complete genomesegregation and condensation protein A2e-1066.2
NC_017305:1037133:104387110438711044689819Corynebacterium pseudotuberculosis PAT10 chromosome, completesegregation and condensation protein A2e-1066.2
NC_017518:1558000:157542015754201576274855Neisseria meningitidis NZ-05/33 chromosome, complete genomesegregation and condensation protein B4e-1065.5
NC_017505:1516348:153434415343441535198855Neisseria meningitidis alpha710 chromosome, complete genomesegregation and condensation protein A4e-1065.5
NC_013947:4695000:471993147199314720863933Stackebrandtia nassauensis DSM 44728 chromosome, complete genomechromosome segregation and condensation protein ScpA2e-0963.5
NC_016783:1169821:118458711845871185405819Corynebacterium diphtheriae INCA 402 chromosome, complete genomesegregation and condensation protein A5e-0962
NC_012806:105133:121866121866122609744Mycoplasma conjunctivae, complete genomeSegregation and condensation protein A1e-0757.8
NC_010320:1585974:158597415859741586705732Thermoanaerobacter sp. X514 chromosome, complete genomechromosome segregation and condensation protein ScpA2e-0756.6
NC_010321:1177238:117951411795141180245732Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completechromosome segregation and condensation protein ScpA2e-0756.6
NC_014964:1169925:117169911716991172436738Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completechromosome segregation and condensation protein ScpA2e-0756.6
NC_014538:1311500:132767713276771328414738Thermoanaerobacter sp. X513 chromosome, complete genomechromosome segregation and condensation protein ScpA2e-0756.6
NC_007633:696604:715358715358716194837Mycoplasma capricolum subsp. capricolum ATCC 27343, completechromosomal segregation and condensation protein A2e-0756.2
NC_014484:1163576:119280411928041193535732Spirochaeta thermophila DSM 6192 chromosome, complete genomesegregation and condensation protein A4e-0755.5
NC_015424:3112637:317486031748603175708849Aeromonas veronii B565 chromosome, complete genomeSegregation and condensation protein A7e-0754.7
NC_016842:748419:759526759526760284759Treponema pallidum subsp. pertenue str. SamoaD chromosome, completesegregation and condensation protein ScpA1e-0654.3
NC_016843:747950:759713759713760471759Treponema pallidum subsp. pertenue str. Gauthier chromosome,segregation and condensation protein ScpA1e-0654.3
NC_016848:748873:759980759980760738759Treponema pallidum subsp. pertenue str. CDC2 chromosome, completesegregation and condensation protein ScpA1e-0654.3
NC_010674:2435241:245717724571772457932756Clostridium botulinum B str. Eklund 17B, complete genomeScpA/B protein2e-0653.5
NC_020134:586840:587910587910588677768Clostridium stercorarium subsp. stercorarium DSM 8532, completesegregation and condensation protein A2e-0653.5
NC_015714:741044:752807752807753565759Treponema paraluiscuniculi Cuniculi A chromosome, complete genomesegregation and condensation protein ScpA2e-0653.1
NC_014315:2177277:217964221796422180454813Nitrosococcus watsoni C-113 chromosome, complete genomechromosome segregation and condensation protein ScpA3e-0652.8
NC_015687:2145452:216625021662502166999750Clostridium acetobutylicum DSM 1731 chromosome, complete genomesegregation and condensation protein A5e-0652
NC_014654:1529500:154507815450781545803726Halanaerobium sp. 'sapolanicus' chromosome, complete genomechromosome segregation and condensation protein ScpA9e-0651.2