Pre_GI: BLASTP Hits

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Query: NC_004431:3513147:3532178 Escherichia coli CFT073, complete genome

Start: 3532178, End: 3532591, Length: 414

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:3161311:319908631990863200063978Escherichia coli 536, complete genomehypothetical type II secretion protein GspK9e-77284
NC_008563:3362058:338086233808623381839978Escherichia coli APEC O1, complete genomeputative type II secretion protein GspK1e-76284
NC_007946:3289151:330795533079553308932978Escherichia coli UTI89, complete genomehypothetical protein1e-76284
NC_011742:3277941:329565432956543296631978Escherichia coli S88 chromosome, complete genometype II secretion protein (GspK-like)1e-76284
NC_010498:3291344:331241533124153313392978Escherichia coli SMS-3-5, complete genomegeneral secretion pathway protein GspK1e-76284
NC_011745:3511600:352846435284643529441978Escherichia coli ED1a chromosome, complete genomeGspK-like type II secretion protein1e-76284
NC_011601:3338888:336989233698923370869978Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype II secretion protein1e-76284
NC_011750:3584000:360198536019853602962978Escherichia coli IAI39 chromosome, complete genomeGspK-like type II secretion protein2e-76283
NC_013364:3701895:376135237613523762329978Escherichia coli O111:H- str. 11128, complete genomeputative type II secretion protein GspK7e-76281
NC_012967:3012317:303123530312353032170936Escherichia coli B str. REL606 chromosome, complete genometype II secretion protein GspK1e-75280
NC_011751:3530954:355409135540913555068978Escherichia coli UMN026 chromosome, complete genomeputative type II secretion protein2e-74277
NC_011740:2986514:298974329897432990720978Escherichia fergusonii ATCC 35469, complete genomeputative type II secretion protein (GspK-like)2e-72270
NC_016612:2902628:294138829413882942374987Klebsiella oxytoca KCTC 1686 chromosome, complete genometype II secretion protein8e-2095.5
NC_007954:138410:1384101384101394981089Shewanella denitrificans OS217, complete genomeGeneral secretion pathway protein K1e-1581.6
NC_011663:180889:184298184298185296999Shewanella baltica OS223 chromosome, complete genomeGeneral secretion pathway protein K2e-1374.7
NC_014836:33278:577975779758765969Desulfurispirillum indicum S5 chromosome, complete genomegeneral secretion pathway protein K1e-0858.5
NC_016818:362548:375932375932376918987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetype II secretory pathway, component PulK2e-0858.2
NC_017047:370837:370837370837371823987Rahnella aquatilis HX2 chromosome, complete genomegeneral secretory pathway component, cryptic3e-0857.4
NC_015061:366552:368183368183369169987Rahnella sp. Y9602 chromosome, complete genomegeneral secretory pathway component, cryptic3e-0857.4
NC_020064:3998715:405359440535944054550957Serratia marcescens FGI94, complete genometype II secretory pathway, component PulK8e-0855.8