Pre_GI: BLASTP Hits

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Query: NC_004347:4007847:4016377 Shewanella oneidensis MR-1, complete genome

Start: 4016377, End: 4017015, Length: 639

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3627438:363158036315803632251672Escherichia coli ED1a chromosome, complete genomeputative disulfide oxidoreductase8e-25113
NC_012918:1660477:169085316908531691527675Geobacter sp. M21 chromosome, complete genomedisulfide oxidoreductase2e-23108
NC_009802:1977596:199207619920761992696621Campylobacter concisus 13826, complete genometetrathionate reductase subunit A4e-22104
NC_009092:2529518:253625025362502536765516Shewanella loihica PV-4, complete genomeDisulphide bond formation protein DsbB2e-1065.9
NC_006512:1942000:195627219562721956817546Idiomarina loihiensis L2TR, complete genomeDisulfide bond formation protein1e-0963.2
NC_015663:4735808:474003047400304740560531Enterobacter aerogenes KCTC 2190 chromosome, complete genomedisulfide bond formation protein B1e-0756.6
NC_011745:1287714:131233113123311312861531Escherichia coli ED1a chromosome, complete genomedisulfide bond formation protein B7e-0753.9
NC_020181:734477:745653745653746132480Enterobacter aerogenes EA1509E, complete genomePeriplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation3e-0652
NC_011601:1315746:133906813390681339598531Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomedisulfide bond formation protein B3e-0652