Pre_GI: BLASTP Hits

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Query: NC_004337:2098736:2109581 Shigella flexneri 2a str. 301, complete genome

Start: 2109581, End: 2110072, Length: 492

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:2153083:216388221638822164373492Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-89327
NC_004741:2081649:209244820924482092939492Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-89327
NC_014306:3210311:322185032218503222800951Erwinia billingiae Eb661, complete genomeGlycosyl transferase, family 21e-56218
NC_021150:1564229:158116015811601582128969Azotobacter vinelandii CA6, complete genomeGlycosyl transferase, family 21e-50198
NC_012560:1564500:158114715811471582115969Azotobacter vinelandii DJ, complete genomeGlycosyl transferase, family 21e-50198
NC_014562:1844268:185475318547531855694942Pantoea vagans C9-1 chromosome, complete genomeDolichol-phosphate mannosyltransferase1e-50198
NC_017047:1862893:187108218710821872071990Rahnella aquatilis HX2 chromosome, complete genomefamily 2 glycosyl transferase2e-49194
NC_014733:1857020:186533018653301866265936Methylovorus sp. MP688 chromosome, complete genomeglycosyl transferase family protein6e-44176
NC_010125:3467379:347253234725323473488957Gluconacetobacter diazotrophicus PAl 5, complete genomeputative glycosyl transferase6e-42169
NC_015942:3147514:3166834316683431678531020Acidithiobacillus ferrivorans SS3 chromosome, complete genomefamily 2 glycosyl transferase1e-40165
NC_019902:27574:330793307934023945Thioalkalivibrio nitratireducens DSM 14787, complete genomeRfbJ protein2e-40164
NC_014539:860402:871231871231872184954Burkholderia sp. CCGE1003 chromosome 1, complete sequencefamily 2 glycosyl transferase1e-38158
NC_010622:2576110:258180125818012582799999Burkholderia phymatum STM815 chromosome 1, complete sequenceglycosyl transferase family 25e-38156
NC_014169:2234249:223738822373882238365978Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 2 glycosyl transferase7e-29126
NC_014616:54500:622016220163151951Bifidobacterium bifidum S17 chromosome, complete genomefamily 2 glycosyl transferase1e-28125
NC_017219:2646157:265218626521862653127942Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative glycosyltransferase2e-28124
NC_011593:2650156:265618526561852657126942Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,family 2 glycosyl transferase2e-28124
NC_013416:875758:884636884636885556921Aggregatibacter actinomycetemcomitans D11S-1, complete genomeglycosyl transferase, family 22e-28124
NC_017218:2119964:214990721499072150872966Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeglycosyltransferase, group 2 family protein7e-27119
NC_004307:1815825:183518118351811836137957Bifidobacterium longum NCC2705, complete genomepossible glycosyltransferase2e-23108
NC_015052:2181514:220562722056272206568942Bifidobacterium longum subsp. infantis 157F, complete genomeglycosyltransferase2e-23108
NC_014656:1829336:183654018365401837484945Bifidobacterium longum subsp. longum BBMN68 chromosome, completewcaa32e-23108
NC_004307:1815825:182458518245851825541957Bifidobacterium longum NCC2705, complete genomepossible glycosyltransferase2e-23108
NC_007950:185500:189604189604190560957Polaromonas sp. JS666 plasmid 2, complete sequenceglycosyl transferase, family 22e-23108
NC_012815:1603916:161010416101041611045942Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyltransferase1e-23108
NC_012814:1599241:161038616103861611327942Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyltransferase1e-23108
NC_017217:1607679:161567316156731616614942Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyltransferase1e-23108
NC_011835:733320:7413147413147423211008Bifidobacterium animalis subsp. lactis AD011 chromosome, completeglycosyltransferase1e-23108
NC_017214:299637:3076263076263086331008Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeglycosyltransferase1e-23108
NC_017215:1605917:1615020161502016160271008Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,dolichyl-phosphate beta-D-mannosyltransferase1e-23108
NC_017216:1603000:1610031161003116110381008Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyl transferase, family 21e-23108
NC_017221:73864:818818188182825945Bifidobacterium longum subsp. longum KACC 91563 chromosome,wcaa31e-23108
NC_010816:1852406:186401918640191864963945Bifidobacterium longum DJO10A, complete genomeGlycosyltransferase for cell wall membrane2e-23107
NC_014656:1829336:1859442185944218607671326Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein8e-23106
NC_010610:1580483:159001715900171590964948Lactobacillus fermentum IFO 3956, complete genomeglycosyltransferase2e-1995.1
NC_015676:2099930:210364821036482104571924Methanosalsum zhilinae DSM 4017 chromosome, complete genomefamily 2 glycosyl transferase4e-1994
NC_007955:1566189:157144715714471572373927Methanococcoides burtonii DSM 6242, complete genomeglycosyl transferase, family 27e-1889.7
NC_014253:2113233:211558521155852116511927Methanohalobium evestigatum Z-7303 chromosome, complete genomeglycosyl transferase family 21e-1685.9
NC_019977:65205:794387943880358921Methanomethylovorans hollandica DSM 15978, complete genomeglycosyl transferase1e-1582
NC_014002:1772060:178833017883301789247918Methanohalophilus mahii DSM 5219 chromosome, complete genomeglycosyl transferase family 22e-1478.2
NC_018876:1489895:149301814930181493956939Methanolobus psychrophilus R15 chromosome, complete genomeglycosyl transferase family protein2e-1374.7
NC_003901:1386000:140501214050121405986975Methanosarcina mazei Go1, complete genomedolichyl-phosphate mannose synthase-like protein1e-0962.8
NC_003901:1346281:134910613491061350005900Methanosarcina mazei Go1, complete genomedolichyl-phosphate mannose synthase-like protein2e-0961.6
NC_003901:1346281:136314613631461364042897Methanosarcina mazei Go1, complete genomedolichol-phosphate mannosyltransferase4e-0857.4
NC_015948:1131628:1152922115292211539921071Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeglycosyltransferase-like protein7e-0856.6
NC_003552:2674385:267583826758382676806969Methanosarcina acetivorans C2A, complete genomedolichyl-phosphate beta-D-mannosyltransferase1e-0755.8
NC_013665:1922000:193154619315461932523978Methanocella paludicola SANAE, complete genomeputative glycosyltransferase1e-0755.5
NC_007426:2248000:227410722741072275051945Natronomonas pharaonis DSM 2160, complete genomeglycosyltransferase 1 (probable dolichyl-phosphate beta-D-mannosyltransferase )2e-0755.5
NC_013967:1375255:138140013814001382311912Haloferax volcanii DS2 chromosome, complete genomeglycosyltransferase AlgJ3e-0754.3
NC_009464:2523092:255409125540912555041951Uncultured methanogenic archaeon RC-I, complete genomeglucosyltransferase (family 2)1e-0652.8
NC_010364:787766:791372791372792289918Halobacterium salinarum R1, complete genomeputative glycosyltransferase, type 21e-0652.8
NC_002607:795777:799383799383800300918Halobacterium sp. NRC-1, complete genomeGtl1e-0652.8
NC_000961:372000:395021395021395935915Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-0652
NC_014254:18193:356363563636526891Methanohalobium evestigatum Z-7303 plasmid pMETEV01, completeglycosyl transferase family 23e-0650.8
NC_015416:1039144:104347310434731044396924Methanosaeta concilii GP-6 chromosome, complete genomeglycosyl transferase, group 2 family protein4e-0650.8
NC_009051:2365711:237922323792232380164942Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, family 25e-0650.4
NC_019962:960831:9639119639119649181008Natrinema pellirubrum DSM 15624, complete genomeglycosyl transferase9e-0649.7