Pre_GI: BLASTP Hits

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Query: NC_004129:5723787:5735782 Pseudomonas fluorescens Pf-5, complete genome

Start: 5735782, End: 5736762, Length: 981

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:165559:195684195684196526843Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein8e-65247
NC_015379:1151143:116911311691131169820708Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-62237
NC_012660:5571500:557986255798625580539678Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-46185
NC_007005:98488:103896103896104600705Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-42173
NC_015733:715947:727554727554728432879Pseudomonas putida S16 chromosome, complete genomehypothetical protein8e-25114