Pre_GI: BLASTP Hits

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Query: NC_004129:5481629:5497835 Pseudomonas fluorescens Pf-5, complete genome

Start: 5497835, End: 5498896, Length: 1062

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4465247:4480759448075944818291071Pseudomonas syringae pv. tomato str. DC3000, complete genometolA protein4e-52205
NC_018080:4465618:4483553448355344845961044Pseudomonas aeruginosa DK2 chromosome, complete genomeTolA protein1e-31137
NC_011770:4763506:4782339478233947833821044Pseudomonas aeruginosa LESB58, complete genomeTolA protein1e-31137
NC_008463:4566976:4595483459548345965261044Pseudomonas aeruginosa UCBPP-PA14, complete genomeTolA protein1e-31137
NC_002516:1031386:1055009105500910560521044Pseudomonas aeruginosa PAO1, complete genomeTolA protein1e-31137
NC_018012:1935500:1953121195312119543981278Thiocystis violascens DSM 198 chromosome, complete genomeTolA protein6e-0652