Pre_GI: BLASTP Hits

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Query: NC_004129:3965947:3969005 Pseudomonas fluorescens Pf-5, complete genome

Start: 3969005, End: 3969781, Length: 777

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:3068495:307764730776473078396750Pseudomonas putida F1, complete genomeThiJ/PfpI domain protein2e-114411
NC_011001:2327633:234700123470012347807807Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative exported Pfp1 family protein4e-79294
NC_011001:2327633:233612423361242336807684Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative Pfp1 family protein7e-53207
NC_010125:74904:976979769798380684Gluconacetobacter diazotrophicus PAl 5, complete genomeputative DJ-1/PfpI family1e-50200
NC_015161:792955:804304804304804990687Deinococcus proteolyticus MRP chromosome, complete genomeThiJ/PfpI domain-containing protein2e-50199
NC_017904:2641270:265840626584062659095690Mycobacterium sp. MOTT36Y chromosome, complete genomethiJ/PfpI family protein3e-49195
NC_020450:1254849:127006112700611270738678Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeintracellular protease/amidase5e-48191
NC_008343:88184:9947799477100166690Granulibacter bethesdensis CGDNIH1, complete genomeThiJ/PfpI family protein3e-46185
NC_008595:1951887:196794619679461968632687Mycobacterium avium 104, complete genomeThiJ/PfpI family protein9e-43173
NC_010552:58294:919469194692659714Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein9e-42170
NC_006055:456711:470174470174470854681Mesoplasma florum L1, complete genomeputative PFPI-like cystiene protease1e-41170
NC_008391:2045348:205124420512442051957714Burkholderia cepacia AMMD chromosome 2, complete sequenceThiJ/PfpI domain protein2e-41169
NC_013421:801542:820907820907821671765Pectobacterium wasabiae WPP163, complete genomeThiJ/PfpI domain protein3e-41168
NC_010125:2884762:293446229344622935244783Gluconacetobacter diazotrophicus PAl 5, complete genomeputative intracellular protease/amidase2e-39162
NC_014623:8763551:876860487686048769299696Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-37154
NC_014307:2735934:275274827527482753437690Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein8e-37154
NC_013173:1259898:128897412889741289657684Desulfomicrobium baculatum DSM 4028, complete genomeThiJ/PfpI domain protein2e-36152
NC_020207:1872000:188022318802231880906684Enterococcus faecium NRRL B-2354, complete genomeThiJ, PfpI family protein1e-35150
NC_020181:1317647:133497513349751335655681Enterobacter aerogenes EA1509E, complete genomeThiJ/PfpI family protein9e-36150
NC_009092:3682413:368607036860703686741672Shewanella loihica PV-4, complete genomeThiJ/PfpI domain protein4e-34145
NC_017047:2079368:208722620872262087930705Rahnella aquatilis HX2 chromosome, complete genomeThiJ/PfpI domain-containing protein1e-33143
NC_006138:2630338:263522426352242635919696Desulfotalea psychrophila LSv54, complete genomesimilar to NonF protein1e-33143
NC_016026:2082500:208712720871272087843717Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDJ-1/PfpI family protein1e-33143
NC_008319:962968:976220976220976912693Synechococcus sp. CC9311, complete genomePredicted intracellular protease/amidase, ThiJ/PfpL family protein5e-32137
NC_015138:693865:699260699260699952693Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeThiJ/PfpI domain-containing protein4e-31135
NC_007912:4364215:4377415437741543785151101Saccharophagus degradans 2-40, complete genomeintracellular protease/amidase-like2e-30132
NC_010552:1212000:122589912258991226585687Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein2e-29129
NC_015376:3320818:333425833342583334935678Burkholderia gladioli BSR3 chromosome chromosome 2, completeNonF-related protein1e-28127
NC_020453:7826358:785114778511477851818672Agromonas oligotrophica S58 DNA, complete genomeputative intracellular protease/amidase1e-28126
NC_021066:1778000:177972217797221780213492Raoultella ornithinolytica B6, complete genomehypothetical protein4e-26118
NC_015312:848403:866992866992867717726Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeThiJ/PfpI domain-containing protein4e-25115
NC_013222:1659619:1683289168328916844071119Robiginitalea biformata HTCC2501, complete genomeDJ-1/PfpI family protein6e-25114
NC_021177:7815791:782297778229777823678702Streptomyces fulvissimus DSM 40593, complete genomeThiJ/PfpI domain-containing protein2e-24112
NC_006361:1720031:174025417402541740949696Nocardia farcinica IFM 10152, complete genomehypothetical protein2e-23109
NC_008541:2037793:205126020512602051961702Arthrobacter sp. FB24 chromosome 1, complete sequenceThiJ/PfpI domain protein5e-1684.7
NC_013169:2423863:242806424280642428795732Kytococcus sedentarius DSM 20547, complete genomeputative intracellular protease/amidase8e-1580.9
NC_015947:1877887:189239018923901893229840Burkholderia sp. JV3 chromosome, complete genomeThiJ/PfpI domain-containing protein1e-1480.1
NC_010943:2091199:210474421047442105583840Stenotrophomonas maltophilia K279a, complete genomeputative ThiJ/PfpI family protein2e-1479.7
NC_011071:1877500:189201218920121892851840Stenotrophomonas maltophilia R551-3, complete genomeThiJ/PfpI domain protein9e-1477.4
NC_016109:954538:972342972342973052711Kitasatospora setae KM-6054, complete genomehypothetical protein1e-1377
NC_010552:58294:926819268193523843Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein2e-1376.6
NC_008391:2045348:205197920519792052821843Burkholderia cepacia AMMD chromosome 2, complete sequenceThiJ/PfpI domain protein2e-1376.3
NC_010125:2813653:282770028277002828578879Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator8e-1374.3
NC_013222:1659619:167914616791461679919774Robiginitalea biformata HTCC2501, complete genomeDJ-1/PfpI family protein9e-1373.9
NC_015312:848403:8657128657128667311020Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-1272.8
NC_007492:2771021:278835227883522789191840Pseudomonas fluorescens PfO-1, complete genomeThiJ/PfpI2e-1169.7
NC_010943:1884695:188791418879141888786873Stenotrophomonas maltophilia K279a, complete genomeputative heat shock chaperone protein2e-0652.8