Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:2234851:2246585 Pseudomonas fluorescens Pf-5, complete genome

Start: 2246585, End: 2247985, Length: 1401

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010296:4384000:4387016438701643884461431Microcystis aeruginosa NIES-843, complete genomehypothetical protein7e-41168
NC_015677:3520524:3530883353088335323941512Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein3e-1067
NC_012881:1802000:1805995180599518073141320Desulfovibrio salexigens DSM 2638, complete genomeAAA ATPase3e-1067
NC_009832:110239:1208911208911219971107Serratia proteamaculans 568, complete genomehypothetical protein6e-1065.9
NC_015711:6707878:671284267128426713249408Myxococcus fulvus HW-1 chromosome, complete genomeputative ATP-binding protein1e-0965.1
NC_017033:276741:2852182852182865671350Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein2e-0963.9
NC_007517:2820909:283017428301742830524351Geobacter metallireducens GS-15, complete genome3e-0963.5
NC_014815:3005970:3014865301486530163911527Micromonospora sp. L5 chromosome, complete genomeaaa atpase2e-0861.2
NC_012491:3736167:3774373377437337756291257Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-0758.5
NC_012660:5571500:5582470558247055839931524Pseudomonas fluorescens SBW25 chromosome, complete genomeputative ATP-binding protein3e-0757.4
NC_017271:4193000:4208657420865742101111455Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein3e-0757
CU928145:299080:309345309345310340996Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein4e-0756.6
NC_011748:299080:309345309345310340996Escherichia coli 55989, complete genomehypothetical protein4e-0756.6
NC_016860:2896254:2909753290975329109221170Salmonella enterica subsp. enterica serovar Typhimurium strputative ATPase6e-0756.2
NC_011083:2847318:2860580286058028618631284Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative ATPase5e-0756.2
NC_003197:2870268:2886073288607328873561284Salmonella typhimurium LT2, complete genomeputative ATPase5e-0756.2
NC_016810:2871689:2908638290863829099211284Salmonella enterica subsp. enterica serovar Typhimurium strputative ATPase5e-0756.2
NC_016856:2896630:2906298290629829075811284Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative ATPase5e-0756.2
NC_016857:2871689:2908638290863829099211284Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative ATPase5e-0756.2
NC_016863:2844883:2854551285455128558341284Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative ATPase5e-0756.2
NC_015164:1260500:126427612642761265118843Bacteroides salanitronis DSM 18170 chromosome, complete genomeAAA ATPase1e-0654.7
NC_015164:3099097:310463531046353105462828Bacteroides salanitronis DSM 18170 chromosome, complete genomeputative ABC transporter ATP-binding protein2e-0654.7
NC_006138:432000:4325504325504338331284Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-0653.9
NC_006576:1435422:1441091144109114424641374Synechococcus elongatus PCC 6301, complete genomeputative excinuclease ATPase subunit5e-0652.8
NC_007604:168176:1784191784191797921374Synechococcus elongatus PCC 7942, complete genomeATPase5e-0652.8
NC_006155:2116834:2123601212360121248721272Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-0652.4