Pre_GI: BLASTP Hits

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Query: NC_004129:1848701:1848701 Pseudomonas fluorescens Pf-5, complete genome

Start: 1848701, End: 1850104, Length: 1404

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:4080937:4100297410029741016041308Pseudomonas putida W619, complete genomeflagellar hook-length control protein7e-66251
NC_002947:4931476:4951006495100649522711266Pseudomonas putida KT2440, complete genomeflagellar hook-length control protein FliK1e-64248
NC_009512:1691930:1691930169193016931951266Pseudomonas putida F1, complete genomeflagellar hook-length control protein1e-64248
NC_017986:4374979:4374979437497943762441266Pseudomonas putida ND6 chromosome, complete genomeflagellar hook-length control protein1e-64247
NC_014366:1814000:1828799182879918310002202Gamma proteobacterium HdN1, complete genomeSimilar to flagellar hook-length control protein4e-1583.2
NC_009654:3849774:3880391388039138820941704Marinomonas sp. MWYL1, complete genomeflagellar hook-length control protein2e-1273.9
NC_007912:2768363:2770177277017727716341458Saccharophagus degradans 2-40, complete genomeFlagellar hook-length control protein-like2e-0964.7
NC_013851:3300278:3314118331411833157101593Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar hook-length control protein3e-0757
NC_019940:293476:2955582955582967661209Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar hook-length control protein6e-0652.8