Pre_GI: BLASTP Hits

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Query: NC_003552:1492500:1509398 Methanosarcina acetivorans C2A, complete genome

Start: 1509398, End: 1509634, Length: 237

Host Lineage: Methanosarcina acetivorans; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This wild-type strain (C2A; DSM2834) is the type strain of this species and was isolated from marine sediment. Anaerobic methane-producing archeon. This organism is a strictly anaerobic, nonmotile, methane-producing Archaea responsible for virtually all biogenic methane production, a process of critical importance as a key step in the global carbon cycle. This process results in the production of significant amounts of greenhouse gas. This organism is also important in production of alternative fuels and plays a role in both agricultural and waste treatment industry. Optimal growth occurs at pH 6.5-7.0.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020389:2288541:230747423074742307797324Methanosarcina mazei Tuc01, complete genomeDNA-directed RNA polymerase subunit H7e-36149
NC_003901:2685716:270256127025612702884324Methanosarcina mazei Go1, complete genomeDNA-directed RNA polymerase subunit H7e-36149
NC_007355:4740161:475917447591744759410237Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceDNA-directed RNA polymerase subunit H1e-32138
NC_019977:1897556:191027419102741910510237Methanomethylovorans hollandica DSM 15978, complete genomeDNA-directed RNA polymerase, subunit H, RpoH/RPB53e-26117
NC_018876:996855:100908210090821009324243Methanolobus psychrophilus R15 chromosome, complete genomeDNA-directed RNA polymerase, subunit H8e-25112
NC_015676:546895:549885549885550121237Methanosalsum zhilinae DSM 4017 chromosome, complete genomeRNA polymerase Rpb58e-25112
NC_007955:1254051:127111012711101271346237Methanococcoides burtonii DSM 6242, complete genomeRNA polymerase subunit, RPB52e-23107
NC_014253:729996:747238747238747474237Methanohalobium evestigatum Z-7303 chromosome, complete genomeRNA polymerase Rpb51e-21101
NC_000917:1693500:169639316963931696623231Archaeoglobus fulgidus DSM 4304, complete genomeDNA-directed RNA polymerase, subunit H (rpoH)5e-1889.7
NC_013790:2337000:234968723496872349935249Methanobrevibacter ruminantium M1 chromosome, complete genomeDNA-directed RNA polymerase subunit H RpoH1e-1788.6
NC_015320:1159613:119575811957581195991234Archaeoglobus veneficus SNP6 chromosome, complete genomeDNA-directed RNA polymerase subunit H2e-1787.8
NC_009634:714715:719161719161719397237Methanococcus vannielii SB chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-1582
NC_013849:651158:670197670197670427231Ferroglobus placidus DSM 10642 chromosome, complete genomeRNA polymerase Rpb52e-1581.3
NC_015574:254731:262243262243262476234Methanobacterium sp. SWAN-1 chromosome, complete genomeDNA-directed RNA polymerase subunit H2e-1581.3
NC_015847:1418036:142335814233581423594237Methanococcus maripaludis XI chromosome, complete genomeDNA-directed RNA polymerase subunit H5e-1579.7
NC_005791:1334880:133903513390351339271237Methanococcus maripaludis S2, complete genomeRNA polymerase H/23 kD subunit5e-1579.7
NC_014658:620819:638354638354638593240Methanothermus fervidus DSM 2088 chromosome, complete genomeDNA-directed RNA polymerase, subunit h2e-1477.4
NC_009635:800000:819679819679819915237Methanococcus aeolicus Nankai-3 chromosome, complete genomeDNA-directed RNA polymerase subunit H4e-1477
NC_015562:1571928:157881915788191579052234Methanotorris igneus Kol 5 chromosome, complete genomeDNA-directed RNA polymerase subunit H4e-1476.6
NC_013156:1182609:118797411879741188210237Methanocaldococcus fervens AG86, complete genomeRNA polymerase Rpb58e-1475.9
NC_015636:468500:487791487791488027237Methanothermococcus okinawensis IH1 chromosome, complete genomeDNA-directed RNA polymerase subunit H9e-1475.5
NC_000909:963984:970761970761970997237Methanocaldococcus jannaschii DSM 2661, complete genomeDNA-directed RNA polymerase, subunit H (rpoH)1e-1375.1
NC_015216:2422758:244222624422262442459234Methanobacterium sp. AL-21 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-1375.1
NC_014471:1153438:117060911706091170869261Ignisphaera aggregans DSM 17230 chromosome, complete genomeDNA-directed RNA polymerase, subunit H2e-1374.7
NC_009033:791515:798567798567798842276Staphylothermus marinus F1, complete genomeRNA polymerase subunit, RPB52e-1374.3
NC_009975:1203372:122280112228011223037237Methanococcus maripaludis C6, complete genomeRNA polymerase Rpb52e-1374.3
NC_013887:1601730:160832316083231608559237Methanocaldococcus sp. FS406-22 chromosome, complete genomeRNA polymerase Rpb53e-1373.9
NC_015931:134601:189031189031189348318Pyrolobus fumarii 1A, complete genomeRNA polymerase Rpb53e-1373.9
NC_009637:602079:607399607399607635237Methanococcus maripaludis C7 chromosome, complete genomeDNA-directed RNA polymerase subunit H4e-1373.2
NC_013407:1527454:154708515470851547339255Methanocaldococcus vulcanius M7, complete genomeRNA polymerase Rpb55e-1373.2
NC_000916:952663:954546954546954779234Methanothermobacter thermautotrophicus str. Delta H, completeDNA-dependent RNA polymerase, subunit H7e-1372.8
NC_015518:685885:703356703356703610255Acidianus hospitalis W1 chromosome, complete genomeRNA polymerase subunit H1e-1271.6
NC_014122:549932:582287582287582523237Methanocaldococcus infernus ME chromosome, complete genomeRNA polymerase Rpb52e-1270.9
NC_015474:105075:118792118792119040249Pyrococcus sp. NA2 chromosome, complete genomeDNA-directed RNA polymerase subunit H4e-1270.1
NC_003413:1448377:146301314630131463261249Pyrococcus furiosus DSM 3638, complete genomeDNA-directed RNA polymerase subunit H4e-1270.1
NC_012883:360348:371434371434371682249Thermococcus sibiricus MM 739, complete genomeDNA-directed RNA polymerase subunit H5e-1269.7
NC_002689:1228061:124147812414781241741264Thermoplasma volcanium GSS1, complete genomeDNA-directed RNA polymerase subunit H6e-1269.7
NC_007181:543000:554034554034554288255Sulfolobus acidocaldarius DSM 639, complete genomeDNA-directed RNA polymerase, subunit H6e-1269.3
NC_002578:377783:413685413685413960276Thermoplasma acidophilum DSM 1728, complete genomeDNA-directed RNA polymerase subunit H6e-1269.3
NC_017954:471000:471005471005471280276Thermogladius cellulolyticus 1633 chromosome, complete genomeDNA-directed RNA polymerase subunit H8e-1268.9
NC_014408:1314382:131785113178511318084234Methanothermobacter marburgensis str. Marburg chromosome, completeDNA-directed RNA polymerase, subunit H1e-1168.6
NC_003106:282320:295283295283295582300Sulfolobus tokodaii str. 7, complete genomehypothetical DNA-directed RNA polymerase subunit H1e-1168.6
NC_000868:571500:579272579272579520249Pyrococcus abyssi GE5, complete genomeDNA-directed RNA polymerase subunit H1e-1168.2
NC_014537:1146000:115073011507301151002273Vulcanisaeta distributa DSM 14429 chromosome, complete genomeRNA polymerase Rpb52e-1167.8
NC_007681:1532500:154980415498041550037234Methanosphaera stadtmanae DSM 3091, complete genomeRpoH3e-1167
NC_014804:189368:195828195828196076249Thermococcus barophilus MP chromosome, complete genomeDNA-directed RNA polymerase subunit H5e-1166.2
NC_000961:1366000:137933213793321379580249Pyrococcus horikoshii OT3, complete genomeDNA-directed RNA polymerase subunit H6e-1166.2
NC_008698:235688:255320255320255562243Thermofilum pendens Hrk 5, complete genomeRNA polymerase subunit, RPB57e-1165.9
NC_012589:1837985:184057618405761840830255Sulfolobus islandicus L.S.2.15, complete genomeRNA polymerase Rpb51e-1065.5
NC_012588:1747963:175055417505541750808255Sulfolobus islandicus M.14.25 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-1065.5
NC_012632:1851991:185458218545821854836255Sulfolobus islandicus M.16.27 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-1065.5
NC_012726:1751713:175481417548141755068255Sulfolobus islandicus M.16.4 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-1065.5
NC_013769:1841908:184784518478451848099255Sulfolobus islandicus L.D.8.5 chromosome, complete genomeRNA polymerase subunit, RPB51e-1065.5
NC_017275:1775794:177889517788951779149255Sulfolobus islandicus HVE10/4 chromosome, complete genomeRNA polymerase Rpb51e-1065.5
NC_017276:1631819:163441016344101634664255Sulfolobus islandicus REY15A chromosome, complete genomeRNA polymerase Rpb51e-1065.5
NC_013741:809030:817672817672817962291Archaeoglobus profundus DSM 5631, complete genomeRNA polymerase Rpb59e-1165.5
NC_002754:181819:196577196577196831255Sulfolobus solfataricus P2, complete genomeDNA-directed RNA polymerase, subunit H (rpoH)2e-1064.3
NC_015435:21736:283342833428585252Metallosphaera cuprina Ar-4 chromosome, complete genomeDNA-directed RNA polymerase subunit H1e-0962
NC_009440:21947:285422854228793252Metallosphaera sedula DSM 5348 chromosome, complete genomeDNA-directed RNA polymerase subunit H3e-0960.8
NC_019791:1454764:146323614632361463490255Caldisphaera lagunensis DSM 15908 chromosome, complete genomeDNA-directed RNA polymerase, subunit H, RpoH/RPB53e-0857.4
NC_016070:1448488:147175914717591472058300Thermoproteus tenax Kra 1, complete genomeDNA-directed RNA polymerase subunit H2e-0857.4
NC_015315:1584890:158672015867201586959240Thermoproteus uzoniensis 768-20 chromosome, complete genomeDNA-directed RNA polymerase subunit H3e-0857
NC_014374:1072218:116463111646311164837207Acidilobus saccharovorans 345-15 chromosome, complete genomeDNA-directed RNA polymerase subunit H3e-0857
NC_009073:1934715:193652819365281936755228Pyrobaculum calidifontis JCM 11548, complete genomeRNA polymerase subunit, RPB53e-0857
NC_005877:284829:295914295914296177264Picrophilus torridus DSM 9790, complete genomeDNA-directed RNA polymerase subunit H7e-0856.2
NC_013926:1037681:105140110514011051655255Aciduliprofundum boonei T469 chromosome, complete genomeRNA polymerase Rpb51e-0652
NC_019942:1270060:128155512815551281809255Aciduliprofundum sp. MAR08-339, complete genomeDNA-directed RNA polymerase, subunit H, RpoH/RPB51e-0652
NC_009376:2074325:207432520743252074552228Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeDNA-directed RNA polymerase subunit H2e-0651.2