Pre_GI Gene

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Host: NC_012726 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012726:1751713 Sulfolobus islandicus M.16.4 chromosome, complete genome

Host Lineage: Sulfolobus islandicus; Sulfolobus; Sulfolobaceae; Sulfolobales; Crenarchaeota; Archaea

General Information: This strain (also called Kamchatka #3) was isolated from a hot spring on the Kamchatka Penninsula, in the Russian Far East. Hyperthermophilic acidophilic sulfur-metabolizing archeon. Sulfolobus islandicus is a thermo-acidophilic archeae commonly identified in hot, acidic sulfur springs. This organism can grow both chemoautotrophically, using sulfur or hydrogen sulfide, and heterotrophically. S. islandicus can play host to a number of plasmids and viruses which may be useful in developing tools for genetic analysis. In addition, Sulfolobus islandicus isolates from different areas in Russia, Iceland, and the United States have been shown to be genetically distinct from each other making this organism useful for comparative analysis.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1751713175200929730S ribosomal protein S28eQuickGO ontologyBLASTP
1752034175221918650S ribosomal protein L24eQuickGO ontologyBLASTP
17522231752639417nucleoside diphosphate kinaseQuickGO ontologyBLASTP
175262817544301803translation initiation factor IF-2QuickGO ontologyBLASTP
17548141755068255DNA-directed RNA polymerase subunit HQuickGO ontologyBLASTP
175506517584603396DNA-directed RNA polymerase subunit BQuickGO ontologyBLASTP
175845317610952643DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
176109217622701179DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
1762277176259431850S ribosomal protein L30eQuickGO ontologyBLASTP
17627361763032297KH type 2 domain proteinQuickGO ontologyBLASTP
1763046176348944430S ribosomal protein S12QuickGO ontologyBLASTP
17635631764039477hypothetical proteinBLASTP
1764118176469958230S ribosomal protein S7QuickGO ontologyBLASTP
176474517660521308elongation factor 1-alphaQuickGO ontologyBLASTP
1766080176638830930S ribosomal protein S10PQuickGO ontologyBLASTP
1766421176650484tRNA-SerQuickGO ontologyBLASTP
17670501767211162hypothetical proteinBLASTP
17681621769070909hypothetical proteinBLASTP
17690341769933900DNA polymerase beta domain-containing protein regionQuickGO ontologyBLASTP
17699051770792888triphosphoribosyl-dephospho-CoA proteinQuickGO ontologyBLASTP
17707431771249507hypothetical proteinBLASTP
17712301771775546ribosomal-protein-alanine acetyltransferaseQuickGO ontologyBLASTP
177176617730071242phosphopantothenoylcysteinede carboxylasephosphopantothenate--cysteine ligaseQuickGO ontologyBLASTP