Pre_GI: BLASTP Hits

Some Help

Query: NC_003277:22257:24215 Salmonella typhimurium LT2 plasmid pSLT, complete sequence

Start: 24215, End: 25242, Length: 1028

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016861:22256:242142421424801588Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-78293
NC_009800:2083465:2083465208346520906167152Escherichia coli HS, complete genome3e-1169.7
NC_010468:1816359:1856327185632718634297103Escherichia coli ATCC 8739, complete genome3e-1169.3
CP002516:1902431:1902431190243119095337103Escherichia coli KO11, complete genome6e-1168.6
CP002185:2181936:2196349219634922034247076Escherichia coli W, complete genome6e-1168.6
NC_013508:3188978:3198205319820532004572253Edwardsiella tarda EIB202, complete genomeputative invasin7e-1168.6
NC_011750:4390000:4426636442663644351468511Escherichia coli IAI39 chromosome, complete genomeputative invasin/intimin protein3e-1066.6
NC_011751:4293966:43084164308416431867210257Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-1066.6
AC_000091:2027648:2047048204704820541517104Escherichia coli W3110 DNA, complete genomeadhesin1e-0964.3
NC_010473:2119480:2133943213394321410467104Escherichia coli str. K-12 substr. DH10B, complete genomeadhesin1e-0964.3
NC_000913:2042935:2042935204293520500387104Escherichia coli K12, complete genomeadhesin1e-0964.3
NC_000913:2028472:2042935204293520500387104Escherichia coli K12, complete genomeadhesin1e-0964.3
NC_012967:1967675:1982862198286219900137152Escherichia coli B str. REL606 chromosome, complete genomeadhesin1e-0964.3
NC_011745:2209288:2222625222262522297287104Escherichia coli ED1a chromosome, complete genomeadhesin1e-0964.3
NC_012947:1769438:1782647178264717897237077Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeIg domain protein group 1 domain protein1e-0964.3
NC_012759:1920955:1935445193544519425217077Escherichia coli BW2952 chromosome, complete genomeadhesin1e-0964.3
NC_013508:343617:3614503614503685297080Edwardsiella tarda EIB202, complete genomeputative invasin2e-0963.9
NC_011751:2327014:2343400234340023514578058Escherichia coli UMN026 chromosome, complete genomeputative invasin4e-0962.4
NC_010498:4967724:4986675498667549919155241Escherichia coli SMS-3-5, complete genomeputative invasin9e-0858.2
NC_011741:2091249:2106830210683021132736444Escherichia coli IAI1 chromosome, complete genomeadhesin5e-0755.8
CU928160:2091249:2106830210683021132736444Escherichia coli IAI1 chromosome, complete genomeadhesin5e-0755.8
NC_010465:1427170:1441580144158014475105931Yersinia pseudotuberculosis YPIII, complete genomeIg domain protein group 1 domain protein5e-0652.4