Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3134156 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3134156, End: 3134344, Length: 189

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3100683:310829131082913108479189Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-2097.4
NC_011147:3075186:308280530828053082993189Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-2097.4
NC_006511:3079512:308713130871313087319189Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-2097.4
NC_004631:3112043:311965131196513119839189Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-2097.4
NC_011149:3187022:319463831946383194775138Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0650.4