Pre_GI: BLASTP Hits

Some Help

Query: NC_003198:1908238:1927122 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1927122, End: 1927397, Length: 276

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:1403733:141465814146581414933276Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein7e-44175
AC_000091:1407693:141920214192021419477276Escherichia coli W3110 DNA, complete genomehypothetical protein7e-44175
NC_010473:1493983:150490815049081505183276Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted protein7e-44175
NC_000913:1404000:141551214155121415787276Escherichia coli K12, complete genomeRac prophage; predicted protein7e-44175
NC_012759:1296000:130757113075711307846276Escherichia coli BW2952 chromosome, complete genomehypothetical protein7e-44175
NC_012947:2366000:238095223809522381227276Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein7e-44175
NC_011415:1472500:148091614809161481191276Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-43174
NC_002655:2142587:215993221599322160207276Escherichia coli O157:H7 EDL933, complete genomeputative membrane protein encoded within prophage CP-933R3e-43173
NC_016902:2580774:259954825995482599823276Escherichia coli KO11FL chromosome, complete genomehypothetical protein6e-42169
CP002185:1493280:150602715060271506302276Escherichia coli W, complete genomeRac prophage; predicted protein6e-42169
CP002516:2580774:259954825995482599823276Escherichia coli KO11, complete genomehypothetical protein6e-42169