Pre_GI: BLASTP Hits

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Query: NC_003197:2870268:2875037 Salmonella typhimurium LT2, complete genome

Start: 2875037, End: 2875270, Length: 234

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:2896254:289860328986032898836234Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-39160
NC_011742:2823000:282812728281272828453327Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1271.6
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1271.6
NC_003198:4453457:450450045045004504700201Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1271.2
NC_011601:846358:857568857568857768201Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-1271.2
NC_020260:312805:320497320497320697201Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-1270.5
NC_006511:2677964:269272326927232692923201Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-1167.4
NC_011147:2676972:268825926882592688459201Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-1167.4
NC_010694:614985:630810630810631010201Erwinia tasmaniensis, complete genomehypothetical protein5e-1166.2
NC_009436:3807420:381175038117503811950201Enterobacter sp. 638, complete genomehypothetical protein1e-1065.1
NC_009436:1466580:147905014790501479250201Enterobacter sp. 638, complete genomehypothetical protein2e-1064.3
NC_013282:3389619:340394834039483404139192Cronobacter turicensis, complete genomeProtein fil9e-1062.4
NC_016810:2871689:288531228853122885608297Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein2e-0754.7