Pre_GI: BLASTP Hits

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Query: NC_003197:1611302:1624193 Salmonella typhimurium LT2, complete genome

Start: 1624193, End: 1624681, Length: 489

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1574057:158093015809301581418489Salmonella enterica subsp. enterica serovar Typhimurium str. 798regulatory protein1e-89328
NC_016863:1575488:158236115823611582849489Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator1e-89328
NC_016860:1614280:162188316218831622371489Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-89328
NC_016857:1576636:158104615810461581534489Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator1e-89328
NC_016856:1621279:163417016341701634658489Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator1e-89328
NC_016810:1576636:158104615810461581534489Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein1e-89328
NC_011149:1578451:159075415907541591242489Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, MarR family2e-88324
NC_011094:1584038:159164115916411592129489Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, MarR family protein3e-88323
NC_003198:1463253:147068014706801471168489Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative regulatory protein3e-88323
NC_015761:1488807:150169715016971502185489Salmonella bongori NCTC 12419, complete genomeregulatory protein8e-82301
NC_014306:2518996:253412825341282534607480Erwinia billingiae Eb661, complete genomeMarR family transcriptional regulator4e-48190
NC_016818:1795576:184578818457881846270483Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetranscriptional regulator4e-36150
NC_010338:588000:588929588929589444516Caulobacter sp. K31, complete genometranscriptional regulator, MarR family1e-22105
NC_014165:374674:376714376714377235522Thermobispora bispora DSM 43833 chromosome, complete genomeMarR family transcriptional regulator4e-1270.5
NC_015957:1070500:109314510931451093645501Streptomyces violaceusniger Tu 4113 chromosome, complete genomeMarR family transcriptional regulator3e-1064.7
NC_016582:5393568:539606953960695396569501Streptomyces bingchenggensis BCW-1 chromosome, complete genomeMarR family transcriptional regulator4e-1063.9
NC_020410:198000:216837216837217268432Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (MarR family)2e-0755.1
NC_020272:3706722:371220637122063712637432Bacillus amyloliquefaciens IT-45, complete genomeMarR family transcriptional regulator2e-0755.1
NC_015514:3307199:330922033092203309663444Cellulomonas fimi ATCC 484 chromosome, complete genomeregulatory protein MarR2e-0754.7
NC_009725:200071:217604217604218035432Bacillus amyloliquefaciens FZB42, complete genomeYxaD1e-0652.8
NC_014551:199500:218149218149218580432Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (MarR family)2e-0652
NC_017191:183500:202040202040202471432Bacillus amyloliquefaciens XH7 chromosome, complete genomeMarR family transcriptional regulator2e-0651.6
NC_017190:182449:200940200940201371432Bacillus amyloliquefaciens LL3 chromosome, complete genometranscriptional regulatorr (MarR family)2e-0651.6
NC_017188:177500:196130196130196561432Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional regulator (MarR family) protein2e-0651.6