Pre_GI: BLASTP Hits

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Query: NC_003197:1207597:1228885 Salmonella typhimurium LT2, complete genome

Start: 1228885, End: 1229301, Length: 417

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1165232:118633811863381186754417Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1curli assembly protein CsgF5e-64242
NC_003198:1117687:113916011391601139576417Salmonella enterica subsp. enterica serovar Typhi str. CT18,assembly/transport component in curli production5e-64242
NC_006905:1186895:120897012089701209386417Salmonella enterica subsp. enterica serovar Choleraesuis strcurli production assembly/transport component, 2nd curli operon5e-64242
NC_011080:1209935:123067212306721231088417Salmonella enterica subsp. enterica serovar Newport str. SL254,curli production assembly/transport component CsgF5e-64242
NC_011083:1216500:123323412332341233650417Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,curli production assembly/transport component CsgF5e-64242
NC_011094:1166271:118719211871921187608417Salmonella enterica subsp. enterica serovar Schwarzengrund strcurli assembly protein CsgF5e-64242
NC_011205:2137696:213769621376962138112417Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853curli assembly protein CsgF5e-64242
NC_011294:2009388:200938820093882009804417Salmonella enterica subsp. enterica serovar Enteritidis strcurli assembly protein CsgF5e-64242
NC_016810:1163919:118502511850251185441417Salmonella enterica subsp. enterica serovar Typhimurium strassembly/transport component in curli production5e-64242
NC_016831:947281:991917991917992333417Salmonella enterica subsp. enterica serovar Gallinarum/pullorumassembly/transport component in curli production5e-64242
NC_016832:1838220:183864218386421839058417Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Curli production assembly/transport component csgF5e-64242
NC_016856:1165941:118704711870471187463417Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Scurli assembly protein CsgF5e-64242
NC_016857:1163919:118502511850251185441417Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74curli assembly protein CsgF5e-64242
NC_016860:1205282:122657112265711226987417Salmonella enterica subsp. enterica serovar Typhimurium strcurli assembly protein CsgF5e-64242
NC_017046:1164176:118509811850981185493396Salmonella enterica subsp. enterica serovar Typhimurium str. 798assembly/transport component in curli production3e-59226
NC_013716:1178383:119909611990961199512417Citrobacter rodentium ICC168, complete genomecurli production assembly/transport component9e-59224
NC_008258:1076922:109591410959141096330417Shigella flexneri 5 str. 8401, complete genomecurli production assembly/transport component csgF precursor9e-58221
NC_000913:1087062:110093411009341101350417Escherichia coli K12, complete genomepredicted transport protein9e-58221
AC_000091:1083798:110195211019521102368417Escherichia coli W3110 DNA, complete genomepredicted transport protein9e-58221
NC_015968:1709680:171699517169951717408414Enterobacter asburiae LF7a chromosome, complete genomeCurli production assembly/transport component CsgF1e-53207
NC_014121:2629075:264300126430012643414414Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecurli assembly protein CsgF7e-53205
NC_016514:1701273:170680217068021707215414Enterobacter cloacae EcWSU1 chromosome, complete genomecurli production assembly/transport component CsgF3e-52203
NC_018868:1960542:201336720133672013765399Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomecurli fiber protein CsgF2e-0960.8