Pre_GI: BLASTP Hits

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Query: NC_003143:645559:665167 Yersinia pestis CO92, complete genome

Start: 665167, End: 666546, Length: 1380

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014029:699078:7186877186877200661380Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0941
NC_009381:427515:4471234471234485021380Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0941
NC_005810:3238391:3257999325799932593781380Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0941
NC_017160:643406:6630146630146643931380Yersinia pestis D182038 chromosome, complete genomemembrane protein0939
NC_013205:854983:8549838549838631338151Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,putative carbohydrate binding8e-1995.5
NC_015555:430054:4507544507544593788625Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeglycosyltransferase 366e-1169.3
NC_014152:421481:4214814214814300578577Thermincola sp. JR, complete genomeglycosyltransferase 363e-1067
NC_019970:510632:5312625312625398868625Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecellobiose phosphorylase5e-1066.2
NC_014410:525645:5442025442025528268625Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,glycosyltransferase 367e-1065.5
NC_012792:547967:5479675479675561598193Variovorax paradoxus S110 chromosome 2, complete genomeputative carbohydrate binding2e-0757.4
NC_020541:4122852:4122852412285241315278676Rhodanobacter sp. 2APBS1, complete genomecellobiose phosphorylase5e-0756.2
NC_016514:2476359:2501528250152825101108583Enterobacter cloacae EcWSU1 chromosome, complete genomeNdvB9e-0755.5
NC_015580:2444845:2463699246369924714477749Novosphingobium sp. PP1Y, complete genomecellobiose phosphorylase1e-0654.7