Pre_GI: BLASTP Hits

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Query: NC_002950:1748582:1749685 Porphyromonas gingivalis W83, complete genome

Start: 1749685, End: 1751052, Length: 1368

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016776:625628:6425006425006438311332Bacteroides fragilis 638R, complete genomeputative outer membrane transport/efflux protein6e-54211
NC_006347:625328:6390356390356403661332Bacteroides fragilis YCH46, complete genomeputative outer membrane efflux protein4e-53209
NC_009613:2353185:2377670237767023791121443Flavobacterium psychrophilum JIP02/86, complete genomeouter membrane efflux protein precursor3e-38159
NC_004663:1499145:1508365150836515097561392Bacteroides thetaiotaomicron VPI-5482, complete genomeouter membrane efflux protein2e-35150
NC_016776:2237404:2249555224955522509581404Bacteroides fragilis 638R, complete genomeputative outer membrane lipoprotein precursor2e-31137
NC_006347:2190000:2200865220086522022681404Bacteroides fragilis YCH46, complete genomeouter membrane efflux protein2e-31137
NC_003228:2245181:2257119225711922585221404Bacteroides fragilis NCTC 9343, complete genomeputative outer membrane lipoprotein precursor6e-31135
NC_017517:1807072:1807072180707218083821311Neisseria meningitidis M01-240355 chromosome, complete genomeputative type I secretion outer membrane protein, TolC family8e-1065.5
NC_017505:1783476:1783476178347617848791404Neisseria meningitidis alpha710 chromosome, complete genomeputative periplasmic type I secretion system protein2e-0964.3
NC_014633:655693:6614356614356626821248Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceouter membrane efflux protein3e-0757
NC_015177:2972701:2987611298761129889271317Pedobacter saltans DSM 12145 chromosome, complete genomeouter membrane efflux protein1e-0654.7
NC_013353:3787991:3788825378882537903061482Escherichia coli O103:H2 str. 12009, complete genometransport channel protein TolC2e-0654.3
AP010958:3787991:3788825378882537903061482Escherichia coli O103:H2 str. 12009 DNA, complete genometransport channel protein TolC2e-0654.3
NC_011750:3683760:3683760368376036852411482Escherichia coli IAI39 chromosome, complete genomeouter membrane channel protein2e-0653.9
NC_010468:694943:7149747149747164551482Escherichia coli ATCC 8739, complete genometype I secretion outer membrane protein, TolC family2e-0653.9
NC_000913:3176000:3176137317613731776181482Escherichia coli K12, complete genomeouter membrane channel precursor protein2e-0653.9
CP002516:693703:7124107124107138911482Escherichia coli KO11, complete genometype I secretion outer membrane protein, TolC family2e-0653.9
NC_010473:3273882:3273882327388232753631482Escherichia coli str. K-12 substr. DH10B, complete genometransport channel2e-0653.9
NC_012759:3063285:3063285306328530647661482Escherichia coli BW2952 chromosome, complete genomeouter membrane channel protein2e-0653.9
NC_012947:708064:7267717267717282521482Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane channel protein2e-0653.9
NC_013364:3840000:3840082384008238415631482Escherichia coli O111:H- str. 11128, complete genometransport channel protein TolC2e-0653.9
NC_016822:3485631:3485631348563134871121482Shigella sonnei 53G, complete genomeouter membrane channel protein2e-0653.9
NC_016902:693703:7124107124107138911482Escherichia coli KO11FL chromosome, complete genomeTolC family type I secretion outer membrane protein2e-0653.9
NC_010170:4409683:4430706443070644321691464Bordetella petrii, complete genomeprobable outer membrane efflux protein5e-0652.8
NC_008570:3220539:3268759326875932701741416Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeouter membrane protein OprM6e-0652.4
NC_011296:102650:1189331189331202491317Thermodesulfovibrio yellowstonii DSM 11347, complete genomeouter membrane efflux protein8e-0652
NC_015563:3203012:3203012320301232044871476Delftia sp. Cs1-4 chromosome, complete genometype I secretion outer membrane protein, TolC family9e-0652